RNA–Protein interactions for RNA: ENST00000327331.2

CDCA8-201, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,303 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-201ENST00000327331 ZNF286BP0CG31 522 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 GAP43P17677 238 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 MTIF2P46199 727 aaKnown RBP12.72□□□□□ -0.37
CDCA8-201ENST00000327331 ZNF131P52739 623 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 INHBEP58166 350 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 CHMP4BP1P59074 171 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 CAP1Q01518 475 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 NR1I3Q14994 352 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 LRRC55Q6ZSA7 311 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 VSTM4Q8IW00 320 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 TRAPPC12Q8WVT3 735 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 TMEM143Q96AN5 459 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 CAPNS2Q96L46 248 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 TSG101Q99816 390 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 PARD6BQ9BYG5 372 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 THAP9Q9H5L6 903 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 XPNPEP1Q9NQW7 623 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 LIMA1Q9UHB6 759 aaKnown RBP12.72□□□□□ -0.37
CDCA8-201ENST00000327331 ODF2LQ9ULJ1 636 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 ZSWIM8A7E2V4 1837 aa12.72□□□□□ -0.37
CDCA8-201ENST00000327331 ZMYM2Q9UBW7 1377 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 CCDC169A6NNP5 214 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 SMPD1P17405 629 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 YY1P25490 414 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 TM4SF4P48230 202 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 ARHGAP1Q07960 439 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 MAP2K5Q13163 448 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 KNOP1Q1ED39 458 aaKnown RBP12.71□□□□□ -0.37
CDCA8-201ENST00000327331 LONRF2Q1L5Z9 754 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 XKR3Q5GH77 459 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 RSRC2Q7L4I2 434 aaKnown RBP12.71□□□□□ -0.37
CDCA8-201ENST00000327331 ZNF720Q7Z2F6 126 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 CPLX3Q8WVH0 158 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 AZI2Q9H6S1 392 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 OLFML3Q9NRN5 406 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 KCND2Q9NZV8 630 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 USP20Q9Y2K6 914 aa12.71□□□□□ -0.37
CDCA8-201ENST00000327331 HTTP42858 3142 aa12.71□□□□□ -0.38
CDCA8-201ENST00000327331 IGKV6D-21A0A0A0MT36 114 aa12.71□□□□□ -0.38
CDCA8-201ENST00000327331 EIF3CLB5ME19 914 aaKnown RBP12.71□□□□□ -0.38
CDCA8-201ENST00000327331 POLGP54098 1239 aaPredicted RBP12.71□□□□□ -0.38
CDCA8-201ENST00000327331 PPP2R3AQ06190 1150 aa12.71□□□□□ -0.38
CDCA8-201ENST00000327331 ACVR2BQ13705 512 aa12.71□□□□□ -0.38
CDCA8-201ENST00000327331 DEFB115Q30KQ5 88 aa12.71□□□□□ -0.38
CDCA8-201ENST00000327331 NOC3LQ8WTT2 800 aaKnown RBP12.71□□□□□ -0.38
CDCA8-201ENST00000327331 AFG1LQ8WV93 481 aa12.71□□□□□ -0.38
CDCA8-201ENST00000327331 ZNF668Q96K58 619 aaPredicted RBP12.71□□□□□ -0.38
CDCA8-201ENST00000327331 EIF3CQ99613 913 aaKnown RBP12.71□□□□□ -0.38
CDCA8-201ENST00000327331 TUBGCP2Q9BSJ2 902 aa12.71□□□□□ -0.38
CDCA8-201ENST00000327331 RPS6KA5O75582 802 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 PLS3P13797 630 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 NR2F2P24468 414 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 PPP1R2P41236 205 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 KLK7P49862 253 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 UBXN1Q04323 297 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 LRRC63Q05C16 580 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 DRP2Q13474 957 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 KCNV1Q6PIU1 500 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 CCDC155Q8N6L0 562 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 PPM1EQ8WY54 764 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 RABGGTAQ92696 567 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 POLR3FQ9H1D9 316 aaPredicted RBP12.7□□□□□ -0.38
CDCA8-201ENST00000327331 VTA1Q9NP79 307 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 VPS18Q9P253 973 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 DIS3Q9Y2L1 958 aaKnown RBP12.7□□□□□ -0.38
CDCA8-201ENST00000327331 MAP2K7O14733 419 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 TGFB1I1O43294 461 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 CA12O43570 354 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 IGBP1P78318 339 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 ADAM9Q13443 819 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 EMC2Q15006 297 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 FILIP1LQ4L180 1135 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 FAM160B1Q5W0V3 765 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 FOXR1Q6PIV2 292 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 ANKRD20A12PQ8NF67 263 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 ZNF507Q8TCN5 953 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 DEF6Q9H4E7 631 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 ATP6V0A4Q9HBG4 840 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 LARSQ9P2J5 1176 aaKnown RBP12.7□□□□□ -0.38
CDCA8-201ENST00000327331 GABRQQ9UN88 632 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
CDCA8-201ENST00000327331 WDR81Q562E7 1941 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 ADGRA3Q8IWK6 1321 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 DKC1O60832 514 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDCA8-201ENST00000327331 EEF1GP26641 437 aaKnown RBP12.69□□□□□ -0.38
CDCA8-201ENST00000327331 PSMC4P43686 418 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 NPTX2P47972 431 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 CASP4P49662 377 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 ADKP55263 362 aaKnown RBP12.69□□□□□ -0.38
CDCA8-201ENST00000327331 SPAG1Q07617 926 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 CCDC40Q4G0X9 1142 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 ZNF467Q7Z7K2 595 aaPredicted RBP12.69□□□□□ -0.38
CDCA8-201ENST00000327331 SYCP3Q8IZU3 236 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 LRRC71Q8N4P6 559 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 NOC4LQ9BVI4 516 aaKnown RBP12.69□□□□□ -0.38
CDCA8-201ENST00000327331 RNPEPQ9H4A4 650 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 SUGCTQ9HAC7 445 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 GJD2Q9UKL4 321 aa12.69□□□□□ -0.38
CDCA8-201ENST00000327331 CCDC151A5D8V7 595 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms