RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 MAML3Q96JK9 1138 aa4.81□□□□□ -1.64
CBX3P1-201ENST00000325243 NBPF4Q96M43 638 aa4.81□□□□□ -1.64
CBX3P1-201ENST00000325243 ZNF512Q96ME7 567 aaPredicted RBP4.81□□□□□ -1.64
CBX3P1-201ENST00000325243 WDR92Q96MX6 357 aa4.81□□□□□ -1.64
CBX3P1-201ENST00000325243 HAPLN2Q9GZV7 340 aa4.81□□□□□ -1.64
CBX3P1-201ENST00000325243 KCMF1Q9P0J7 381 aa4.81□□□□□ -1.64
CBX3P1-201ENST00000325243 DNAI1Q9UI46 699 aa4.81□□□□□ -1.64
CBX3P1-201ENST00000325243 GRID2IPA4D2P6 1211 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 NPTXRO95502 500 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 NUDT3O95989 172 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 HNRNPLP14866 589 aaKnown RBP eCLIP4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 KIF11P52732 1056 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 SERINC3Q13530 473 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 CCDC142Q17RM4 750 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 ZC3H12BQ5HYM0 836 aaKnown RBP4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 KRT40Q6A162 431 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 MFSD5Q6N075 450 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 NTN5Q8WTR8 489 aaPredicted RBP4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 E2F7Q96AV8 911 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 TRIM39Q9HCM9 518 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 POLR3BQ9NW08 1133 aaPredicted RBP4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 SIRPGQ9P1W8 387 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 FZD1Q9UP38 647 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 HS3ST4Q9Y661 456 aa4.8□□□□□ -1.64
CBX3P1-201ENST00000325243 UBA6A0AVT1 1052 aaPredicted RBP4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 KCNQ2O43526 872 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 MFAP3LO75121 409 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 IPO13O94829 963 aaKnown RBP4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 APPP05067 770 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 JUNP05412 331 aaKnown RBP4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 ITGB1P05556 798 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 LMO1P25800 156 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 ZFP36P26651 326 aaKnown RBP4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 NAIF1Q69YI7 327 aaPredicted RBP4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 LRRC55Q6ZSA7 311 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 CXorf67Q86X51 503 aaPredicted RBP4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 SYNE4Q8N205 404 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 PROKR1Q8TCW9 393 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 NCDNQ9UBB6 729 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 PPP1R1BQ9UD71 204 aaPredicted RBP4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 PACSIN3Q9UKS6 424 aa4.79□□□□□ -1.64
CBX3P1-201ENST00000325243 M0R2C6 588 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 RHOBTB3O94955 611 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 ABHD16AO95870 558 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 PTTG1IPP53801 180 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 SPIDRQ14159 915 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 MYBPC3Q14896 1274 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 TTC38Q5R3I4 469 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 LY6G5CQ5SRR4 150 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 PRAMEF9Q5VWM5 478 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 BMP8AQ7Z5Y6 402 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 PRIMA1Q86XR5 153 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 CMTM4Q8IZR5 234 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 THAP3Q8WTV1 239 aaPredicted RBP4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 ARL8AQ96BM9 186 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 DEPDC7Q96QD5 511 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 MRPL4Q9BYD3 311 aaKnown RBP4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 SNTG2Q9NY99 539 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 SORCS3Q9UPU3 1222 aa4.78□□□□□ -1.64
CBX3P1-201ENST00000325243 GLRX3O76003 335 aaKnown RBP4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 HK1P19367 917 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 PTX3P26022 381 aaPredicted RBP4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 PTPAQ15257 358 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 ARHGAP44Q17R89 818 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 FAM214AQ32MH5 1076 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 JMYQ8N9B5 988 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 CPT1CQ8TCG5 803 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 ZNF764Q96H86 408 aaPredicted RBP4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 C16orf92Q96LL3 132 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 ZNF768Q9H5H4 540 aaKnown RBP4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 C14orf93Q9H972 538 aaKnown RBP4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 ACSS2Q9NR19 701 aa4.77□□□□□ -1.65
CBX3P1-201ENST00000325243 CFBP00751 764 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 GNAT2P19087 354 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 KIR2DL3P43628 341 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 NPEPPSP55786 919 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 NAALADL2Q58DX5 795 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 DCAF17Q5H9S7 520 aaPredicted RBP4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 CHST14Q8NCH0 376 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 BEND2Q8NDZ0 799 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 BBC3Q96PG8 261 aaPredicted RBP4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 TUBGCP5Q96RT8 1024 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 DNAJC7Q99615 494 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 RIOX1Q9H6W3 641 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 ZNHIT2Q9UHR6 403 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 COL4A3Q01955 1670 aa4.76□□□□□ -1.65
CBX3P1-201ENST00000325243 A0A0A6YYK5 440 aaPredicted RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 DAPK3O43293 454 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 MTSS1O43312 755 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 BCAR1P56945 870 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 MRPS21P82921 87 aaKnown RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 HECTD2Q5U5R9 776 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 LRCH2Q5VUJ6 765 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 ZCCHC8Q6NZY4 707 aaKnown RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 LRP10Q7Z4F1 713 aa4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 APBB1IPQ7Z5R6 666 aaPredicted RBP4.75□□□□□ -1.65
CBX3P1-201ENST00000325243 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms