RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 HNRNPH1P31943 449 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 SREBF1P36956 1147 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 AOC3Q16853 763 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 ACTRT1Q8TDG2 376 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 NAP1L3Q99457 506 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 JPH2Q9BR39 696 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 AGPAT3Q9NRZ7 376 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 KIAA1551Q9HCM1 1747 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 GSTTP1A0A1W2PQM5 241 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 TMEM150BA6NC51 233 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 ARP10275 920 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 MAP2K1Q02750 393 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 TNIP1Q15025 636 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 UAP1Q16222 522 aaPredicted RBP13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 RPUSD2Q8IZ73 545 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 C18orf8Q96DM3 657 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 KCNK9Q9NPC2 374 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 APEX2Q9UBZ4 518 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 MTRF1LQ9UGC7 380 aaKnown RBP13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 ASIC3Q9UHC3 531 aa13.94□□□□□ -0.18
HMGCS1-201ENST00000325110 ECE2O60344 883 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 DLATP10515 647 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 ALDH1B1P30837 517 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 MARCKSL1P49006 195 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 ACTN3Q08043 901 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 ITGB3BPQ13352 177 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 GKAP1Q5VSY0 366 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 HHIPL2Q6UWX4 724 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 LRRC57Q8N9N7 239 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 FBXO25Q8TCJ0 367 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 KAT5Q92993 513 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 NACC1Q96RE7 527 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 STK33Q9BYT3 514 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 LARSQ9P2J5 1176 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 FAM198AQ9UFP1 575 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 GGT7Q9UJ14 662 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 NHSL1Q5SYE7 1610 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 POLRMTO00411 1230 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 SLITRK3O94933 977 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 ADRA2BP18089 450 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 GUCY2CP25092 1073 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 TNFRSF8P28908 595 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 PRELPP51888 382 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 MARSP56192 900 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 SPIRE1Q08AE8 756 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 HOOK3Q86VS8 718 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 CCDC50Q8IVM0 306 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 NEK9Q8TD19 979 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 SCFD2Q8WU76 684 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 PSMD1Q99460 953 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 WDR18Q9BV38 432 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 TEKT3Q9BXF9 490 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 EHMT1Q9H9B1 1298 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 SUCLA2Q9P2R7 463 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 ALG6Q9Y672 507 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 A0A1W2PRG0 241 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 CAND2O75155 1236 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 ACSL3O95573 720 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 DLG4P78352 724 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 CERKQ8TCT0 537 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 KRT35Q92764 455 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 SAAL1Q96ER3 474 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 SLITRK6Q9H5Y7 841 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 AZI2Q9H6S1 392 aa13.93□□□□□ -0.18
HMGCS1-201ENST00000325110 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 FAM107AO95990 144 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 ALAS1P13196 640 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 FAM102BQ5T8I3 360 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 PADI6Q6TGC4 694 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 ARHGAP27Q6ZUM4 889 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 LENG9Q96B70 501 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 MRRFQ96E11 262 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 BICD1Q96G01 975 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 FAM84AQ96KN4 292 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 PAIP2Q9BPZ3 127 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 CBWD1Q9BRT8 395 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 TAOK3Q9H2K8 898 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 ERVK-5Q9HDB9 667 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 MYO3BQ8WXR4 1341 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 SLC16A3O15427 465 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 RAD17O75943 681 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 NPR1P16066 1061 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 PEX3P56589 373 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 BFSP1Q12934 665 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 LRRC14Q15048 493 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 E2F5Q15329 346 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 EPC2Q52LR7 807 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 CEP55Q53EZ4 464 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 C2CD6Q53TS8 623 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 TMC3Q7Z5M5 1100 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 SLC30A5Q8TAD4 765 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 GJD4Q96KN9 370 aaPredicted RBP13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 CALR3Q96L12 384 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 SIX2Q9NPC8 291 aa13.92□□□□□ -0.18
HMGCS1-201ENST00000325110 TBX3O15119 743 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms