RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 UPP2O95045 317 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 TCP1P17987 556 aaKnown RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 SLC12A2P55011 1212 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 YWHAGP61981 247 aaKnown RBP eCLIP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 DPYDQ12882 1025 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 SCYL1Q96KG9 808 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 PANX2Q96RD6 677 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 HEMGNQ9BXL5 484 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 FHDC1Q9C0D6 1143 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 CEP72Q9P209 647 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 DRAP1Q14919 205 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 USP50Q70EL3 339 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 BEST2Q8NFU1 509 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 NEK9Q8TD19 979 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 GLIS2Q9BZE0 524 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 CPA4Q9UI42 421 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 PACSIN2Q9UNF0 486 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 ATP8B3O60423 1300 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 CARNS1A5YM72 827 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 MANSC4A6NHS7 340 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 RGS16O15492 202 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 CACNB2Q08289 660 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 DGKZQ13574 1117 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 EMC2Q15006 297 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 FAM117BQ6P1L5 589 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 SLC30A10Q6XR72 485 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 TAOK1Q7L7X3 1001 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 TRIM11Q96F44 468 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 SHPRHQ149N8 1683 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 USP27XA6NNY8 438 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 ZNF500O60304 480 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 GH1P01241 217 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 ALDH3A1P30838 453 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 MTMR3Q13615 1198 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 SETDB1Q15047 1291 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 FYB2Q5VWT5 728 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 KCTD16Q68DU8 428 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 ALKBH5Q6P6C2 394 aaKnown RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 PDZD4Q76G19 769 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 CDR2LQ86X02 465 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 FBXO16Q8IX29 292 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-201ENST00000324501 THEM5Q8N1Q8 247 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 URGCPQ8TCY9 931 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 RNF139Q8WU17 664 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 SMC6Q96SB8 1091 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 IL17RBQ9NRM6 502 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 HSPBP1Q9NZL4 362 aa7.81□□□□□ -1.16
PSEN1-201ENST00000324501 LCP1P13796 627 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 VCAM1P19320 739 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 BASP1P80723 227 aaKnown RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 PRPSAP1Q14558 356 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 SEZ6Q53EL9 994 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 CATSPER3Q86XQ3 398 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 MAP7D3Q8IWC1 876 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 SKA2Q8WVK7 121 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 C11orf70Q9BRQ4 267 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ZMYND12Q9H0C1 365 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 PLCB1Q9NQ66 1216 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 SMYD2Q9NRG4 433 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 PASKQ96RG2 1323 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 FMN2Q9NZ56 1722 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 HUS1O60921 280 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 TUBBP07437 444 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ELF1P32519 619 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 TCF7P36402 384 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 PLTPP55058 493 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 CDC42EP1Q00587 391 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 EVX2Q03828 476 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 NME3Q13232 169 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 SMAD1Q15797 465 aaKnown RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 NAALADL2Q58DX5 795 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 PPP6R3Q5H9R7 873 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 C10orf76Q5T2E6 689 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 GSDMBQ8TAX9 411 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 MOV10L1Q9BXT6 1211 aaKnown RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 C2orf40Q9H1Z8 148 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 NGRNQ9NPE2 291 aaKnown RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ANAPC7Q9UJX3 599 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 NR2E3Q9Y5X4 410 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 PIK3C2AO00443 1686 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 MSH4O15457 936 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ICAM1P05362 532 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 GNA15P30679 374 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 SHMT1P34896 483 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 NPEPPSP55786 919 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 SARNPP82979 210 aaKnown RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 TSTA3Q13630 321 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 TTC30AQ86WT1 665 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ARFGAP2Q8N6H7 521 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 SLITRK6Q9H5Y7 841 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 EFCAB8A8MWE9 144 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 NFIBO00712 420 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ARP10275 920 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ZNF131P52739 623 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 TROAPQ12815 778 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ZNF211Q13398 564 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 ORC2Q13416 577 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-201ENST00000324501 BIRC2Q13490 618 aa7.8□□□□□ -1.16
PSEN1-201ENST00000324501 EFCAB12Q6NXP0 572 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms