RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 PDE2AO00408 941 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-201ENST00000323668 GGPS1O95749 300 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 NPR1P16066 1061 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 PODNQ7Z5L7 613 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 STAM2O75886 525 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 FOXR1Q6PIV2 292 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 TPCN2Q8NHX9 752 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 AENQ8WTP8 325 aaKnown RBP15.83■□□□□ 0.12
TCOF1-201ENST00000323668 CELF4Q9BZC1 486 aaKnown RBP15.83■□□□□ 0.12
TCOF1-201ENST00000323668 ANKFY1Q9P2R3 1169 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 FAM208AQ9UK61 1670 aaKnown RBP15.83■□□□□ 0.12
TCOF1-201ENST00000323668 PHF20L1A8MW92 1017 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 RNF225M0QZC1 329 aaPredicted RBP15.83■□□□□ 0.12
TCOF1-201ENST00000323668 WNT7AO00755 349 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 LUC7L3O95232 432 aaKnown RBP15.83■□□□□ 0.12
TCOF1-201ENST00000323668 ADRA2BP18089 450 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 CA4P22748 312 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 HDLBPQ00341 1268 aaKnown RBP15.83■□□□□ 0.12
TCOF1-201ENST00000323668 AMPD2Q01433 879 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 FUT2Q10981 343 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 PPP1R2P3Q6NXS1 205 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 PACSIN1Q9BY11 444 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 INTUQ9ULD6 942 aa15.83■□□□□ 0.12
TCOF1-201ENST00000323668 RILPQ96NA2 401 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 TUFT1Q9NNX1 390 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.82■□□□□ 0.12
TCOF1-201ENST00000323668 IPO5O00410 1097 aaKnown RBP15.82■□□□□ 0.12
TCOF1-201ENST00000323668 KLRC4O43908 158 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 RNF8O76064 485 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 TMEM253P0C7T8 217 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 BRAFP15056 766 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 PPP2R5AQ15172 486 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 SRRM1Q8IYB3 904 aaKnown RBP15.82■□□□□ 0.12
TCOF1-201ENST00000323668 MYCBPAPQ8TBZ2 947 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 CYTH3O43739 400 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 CAV1Q03135 178 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 CATSPER3Q86XQ3 398 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 TRIM59Q8IWR1 403 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 CCDC110Q8TBZ0 833 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 SEC16BQ96JE7 1060 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 ERP44Q9BS26 406 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 LXNQ9BS40 222 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 HEMGNQ9BXL5 484 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 MLXIPLQ9NP71 852 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 LCMT1Q9UIC8 334 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 ZNF233A6NK53 670 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 IL17AQ16552 155 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 FLAD1Q8NFF5 587 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 XPO6Q96QU8 1125 aaKnown RBP15.82■□□□□ 0.12
TCOF1-201ENST00000323668 SEPT9Q9UHD8 586 aaPredicted RBP15.82■□□□□ 0.12
TCOF1-201ENST00000323668 TRPC6Q9Y210 931 aa15.82■□□□□ 0.12
TCOF1-201ENST00000323668 NFAT5O94916 1531 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 NOP56O00567 594 aaKnown RBP15.81■□□□□ 0.12
TCOF1-201ENST00000323668 AGTP01019 485 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 HNRNPH1P31943 449 aaKnown RBP15.81■□□□□ 0.12
TCOF1-201ENST00000323668 CCDC14Q49A88 953 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 MEI1Q5TIA1 1274 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 SLC4A9Q96Q91 983 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 TDRD3Q9H7E2 651 aaKnown RBP15.81■□□□□ 0.12
TCOF1-201ENST00000323668 NOP53Q9NZM5 478 aaKnown RBP15.81■□□□□ 0.12
TCOF1-201ENST00000323668 DCCP43146 1447 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 KRT1P04264 644 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 EIF2AK2P19525 551 aaKnown RBP15.81■□□□□ 0.12
TCOF1-201ENST00000323668 EPHA7Q15375 998 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 CEP55Q53EZ4 464 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 ZNF662Q6ZS27 426 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 RIOX1Q9H6W3 641 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 RASA4BC9J798 803 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 RASA4O43374 803 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 SORBS3O60504 671 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 P4HBP07237 508 aaKnown RBP15.81■□□□□ 0.12
TCOF1-201ENST00000323668 HSPA1LP34931 641 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 RNASELQ05823 741 aaKnown RBP15.81■□□□□ 0.12
TCOF1-201ENST00000323668 LRRC14Q15048 493 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 SPATA31A1Q5TZJ5 1347 aa15.81■□□□□ 0.12
TCOF1-201ENST00000323668 SLC16A4O15374 487 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 SYT2Q8N9I0 419 aaPredicted RBP15.8■□□□□ 0.12
TCOF1-201ENST00000323668 MKNK1Q9BUB5 465 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 CARD9Q9H257 536 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 BCL9O00512 1426 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 RTN2O75298 545 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 FGFR4P22455 802 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 PON1P27169 355 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 SESN3P58005 492 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 TNFAIP1Q13829 316 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 KRT39Q6A163 491 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 PHLDB3Q6NSJ2 640 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 FAM47EQ6ZV65 393 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 C3orf67Q6ZVT6 689 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 PNMA5Q96PV4 448 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 ADAM22Q9P0K1 906 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 NYAP2Q9P242 653 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 REXO2Q9Y3B8 237 aaKnown RBP15.8■□□□□ 0.12
TCOF1-201ENST00000323668 ALG6Q9Y672 507 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 RCCD1A6NED2 376 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 CCDC160A6NGH7 325 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 PJA2O43164 708 aa15.8■□□□□ 0.12
TCOF1-201ENST00000323668 SYF2O95926 243 aaKnown RBP15.8■□□□□ 0.12
TCOF1-201ENST00000323668 TMEM191BP0C7N4 346 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms