RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 SMC6Q96SB8 1091 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 RMDN3Q96TC7 470 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 TSC22D3Q99576 134 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 PRR12Q9ULL5 1215 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.42■□□□□ 0.22
VARS2-201ENST00000321897 MKRN3Q13064 507 aaKnown RBP16.42■□□□□ 0.22
VARS2-201ENST00000321897 PRMT6Q96LA8 375 aaPredicted RBP16.42■□□□□ 0.22
VARS2-201ENST00000321897 AZI2Q9H6S1 392 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 SRCAPQ6ZRS2 3230 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 TMEM150BA6NC51 233 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 RAD51CO43502 376 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 EXOC7Q9UPT5 735 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 ZNF148Q9UQR1 794 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 L3MBTL1Q9Y468 752 aa16.42■□□□□ 0.22
VARS2-201ENST00000321897 WDR91A4D1P6 747 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 THAP12O43422 761 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 SCYL3Q8IZE3 742 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.41■□□□□ 0.22
VARS2-201ENST00000321897 SGSM3Q96HU1 749 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 AGBL1Q96MI9 1066 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
VARS2-201ENST00000321897 DONSONQ9NYP3 566 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 EMSYQ7Z589 1322 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 FAM153BP0C7A2 387 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 SRGAP2CP0DJJ0 459 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 EN1Q05925 392 aaPredicted RBP16.41■□□□□ 0.22
VARS2-201ENST00000321897 FUT2Q10981 343 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 FAM153CQ494X1 144 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 SCYL2Q6P3W7 929 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 TMEM139Q8IV31 216 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 CHMP6Q96FZ7 201 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 KIF9Q9HAQ2 790 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 FAM153AQ9UHL3 310 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 RASGRF2O14827 1237 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 FTLP02792 175 aaPredicted RBP16.41■□□□□ 0.22
VARS2-201ENST00000321897 KAT2BQ92831 832 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 NT5C1BQ96P26 610 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 RUSC1Q9BVN2 902 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 GPRC5CQ9NQ84 441 aa16.41■□□□□ 0.22
VARS2-201ENST00000321897 TTC7AQ9ULT0 858 aaPredicted RBP16.41■□□□□ 0.22
VARS2-201ENST00000321897 TTI1O43156 1089 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 FAM107AO95990 144 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 CYP11B2P19099 503 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 KCNJ1P48048 391 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 LDHDQ86WU2 507 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 SART1O43290 800 aaKnown RBP16.4■□□□□ 0.22
VARS2-201ENST00000321897 MAPK4P31152 587 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 MTMR1Q13613 665 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 SP8Q8IXZ3 490 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 FAM213AQ9BRX8 229 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 KLHL11Q9NVR0 708 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 PCDHB4Q9Y5E5 795 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 GLI1P08151 1106 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 NSFP46459 744 aaKnown RBP16.4■□□□□ 0.22
VARS2-201ENST00000321897 TFAMQ00059 246 aaKnown RBP16.4■□□□□ 0.22
VARS2-201ENST00000321897 COG2Q14746 738 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 IQCDQ96DY2 449 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 PNMA5Q96PV4 448 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 OSBPL1AQ9BXW6 950 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 ITIH6Q6UXX5 1313 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 LMNB1P20700 586 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 GALCP54803 685 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 SYCP2LQ5T4T6 812 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 SUGP1Q8IWZ8 645 aaKnown RBP16.4■□□□□ 0.22
VARS2-201ENST00000321897 RPUSD2Q8IZ73 545 aaKnown RBP16.4■□□□□ 0.22
VARS2-201ENST00000321897 ETNK1Q9HBU6 452 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 FZD1Q9UP38 647 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 PLAGL2Q9UPG8 496 aa16.4■□□□□ 0.22
VARS2-201ENST00000321897 NOC2LQ9Y3T9 749 aaKnown RBP16.4■□□□□ 0.22
VARS2-201ENST00000321897 SYNJ2BP-COX16A0A087WUM0 186 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 PIK3CAP42336 1068 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 RFX8Q6ZV50 586 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 LONP2Q86WA8 852 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 AMIGO3Q86WK7 504 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 COX16Q9P0S2 106 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 INO80B-WBP1J3KQ70 363 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 FANCGO15287 622 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 PPP4CP60510 307 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 DR1Q01658 176 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 ANKRD20A3Q5VUR7 823 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 GADL1Q6ZQY3 521 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 CTAGE3PQ8IX95 158 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 FAM84AQ96KN4 292 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 INO80BQ9C086 356 aaPredicted RBP16.39■□□□□ 0.21
VARS2-201ENST00000321897 NOD2Q9HC29 1040 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 BLOC1S4Q9NUP1 217 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 hCG_2014768A0A024R1R8 64 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 CYP26A1O43174 497 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 OPHN1O60890 802 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 ATP5DP30049 168 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 MSH2P43246 934 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 PDIA5Q14554 519 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
VARS2-201ENST00000321897 SPIRE2Q8WWL2 714 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms