RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ALG3Q92685 438 aa19.32■□□□□ 0.68
PRKCB-202ENST00000321728 RTCBQ9Y3I0 505 aaKnown RBP19.32■□□□□ 0.68
PRKCB-202ENST00000321728 HGSO14964 777 aaPredicted RBP19.31■□□□□ 0.68
PRKCB-202ENST00000321728 KRT16P08779 473 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 PLCG2P16885 1265 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 ZNF131P52739 623 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 DRG2P55039 364 aaKnown RBP19.31■□□□□ 0.68
PRKCB-202ENST00000321728 COPS2P61201 443 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 PPATQ06203 517 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 AUHQ13825 339 aaKnown RBP19.31■□□□□ 0.68
PRKCB-202ENST00000321728 NFIXQ14938 502 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 SLC35C1Q96A29 364 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 ARHGEF26Q96DR7 871 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 NLRP3Q96P20 1036 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 DHX36Q9H2U1 1008 aaKnown RBP19.31■□□□□ 0.68
PRKCB-202ENST00000321728 HOMER3Q9NSC5 361 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 NCANO14594 1321 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 MED24O75448 989 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 NR3C1P04150 777 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 HOXD13P35453 343 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 NUGGCQ68CJ6 796 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 ARMC2Q8NEN0 867 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 SLC30A5Q8TAD4 765 aa19.31■□□□□ 0.68
PRKCB-202ENST00000321728 METTL14Q9HCE5 456 aaKnown RBP19.31■□□□□ 0.68
PRKCB-202ENST00000321728 RIPK2O43353 540 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 SLC12A3P55017 1021 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 PABPC4Q13310 644 aaKnown RBP eCLIP19.3■□□□□ 0.689e-10■■□□□ 11.7
PRKCB-202ENST00000321728 ERICH1Q86X53 443 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 WDR66Q8TBY9 1149 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 MLXIPLQ9NP71 852 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 MAST2Q6P0Q8 1798 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 KIF13BQ9NQT8 1826 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 MEIS1O00470 390 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 PHF2O75151 1096 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 RPL13P26373 211 aaKnown RBP19.3■□□□□ 0.68
PRKCB-202ENST00000321728 RFC4P35249 363 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 SOX5P35711 763 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 CAPRIN2Q6IMN6 1127 aaKnown RBP19.3■□□□□ 0.68
PRKCB-202ENST00000321728 BTNL9Q6UXG8 535 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 GBP7Q8N8V2 638 aaPredicted RBP19.3■□□□□ 0.68
PRKCB-202ENST00000321728 IFT74Q96LB3 600 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 THAP2Q9H0W7 228 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 PARP2Q9UGN5 583 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 PITPNM2Q9BZ72 1349 aa19.3■□□□□ 0.68
PRKCB-202ENST00000321728 PDXKO00764 312 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 VCAM1P19320 739 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 PTGIRP43119 386 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 GIT2Q14161 759 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 GALNTL6Q49A17 601 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
PRKCB-202ENST00000321728 EXOC3L1Q86VI1 746 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 REEP2Q9BRK0 252 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 PNMA3Q9UL41 463 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 TMEM110-MUSTN1A8MSY1 372 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 OAS1P00973 400 aaKnown RBP19.29■□□□□ 0.68
PRKCB-202ENST00000321728 SLURP2P0DP57 97 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 CHRNA3P32297 505 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 PPP4CP60510 307 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 BNIP1Q12981 228 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 GRIK3Q13003 919 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 LONRF1Q17RB8 773 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 ANKRD42Q8N9B4 389 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 SETDB2Q96T68 719 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 KIF9Q9HAQ2 790 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 TRIM33Q9UPN9 1127 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 PTPN22Q9Y2R2 807 aa19.29■□□□□ 0.68
PRKCB-202ENST00000321728 MSH2P43246 934 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 PSMC6P62333 389 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 LACTBP83111 547 aaPredicted RBP19.28■□□□□ 0.68
PRKCB-202ENST00000321728 DRAP1Q14919 205 aaPredicted RBP19.28■□□□□ 0.68
PRKCB-202ENST00000321728 CLUL1Q15846 466 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 KCNK9Q9NPC2 374 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 SLC5A4Q9NY91 659 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 TAS2R14Q9NYV8 317 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 TMEM120BA0PK00 339 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 PODXLO00592 558 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 LDHCP07864 332 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 TNFAIP3P21580 790 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 BTDP43251 543 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 ATP11AP98196 1134 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 ASPRV1Q53RT3 343 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 CCDC137Q6PK04 289 aaKnown RBP19.28■□□□□ 0.68
PRKCB-202ENST00000321728 PRELID2Q8N945 189 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 TMEM109Q9BVC6 243 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 TAOK3Q9H2K8 898 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 PSTPIP2Q9H939 334 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.28■□□□□ 0.685e-7■□□□□ 8.9
PRKCB-202ENST00000321728 DNAJC12Q9UKB3 198 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 COG5Q9UP83 839 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 ALG6Q9Y672 507 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 NAV1Q8NEY1 1877 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 PNMA6FA0A0J9YX94 578 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 KIF3CO14782 793 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 PPP1R11O60927 126 aaPredicted RBP19.28■□□□□ 0.68
PRKCB-202ENST00000321728 GCNT3O95395 438 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 ATP2A2P16615 1042 aaKnown RBP19.28■□□□□ 0.68
PRKCB-202ENST00000321728 GBP1P32455 592 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 TTC27Q6P3X3 843 aa19.28■□□□□ 0.68
PRKCB-202ENST00000321728 ARHGEF2Q92974 986 aaKnown RBP19.28■□□□□ 0.68
PRKCB-202ENST00000321728 JMJD4Q9H9V9 463 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms