RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 CTCFP49711 727 aaPredicted RBP14.28□□□□□ -0.12
NBPF3-201ENST00000318220 DYNLT1P63172 113 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 SMAP1Q8IYB5 467 aaPredicted RBP14.28□□□□□ -0.12
NBPF3-201ENST00000318220 C7orf61Q8IZ16 206 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 L3MBTL3Q96JM7 780 aaPredicted RBP14.28□□□□□ -0.12
NBPF3-201ENST00000318220 APOL5Q9BWW9 433 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 FAM107BQ9H098 131 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 CERS4Q9HA82 394 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 GPR182O15218 404 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
NBPF3-201ENST00000318220 LBX1P52954 281 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 RHBDL3P58872 404 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 SPATA2LQ8IUW3 424 aaPredicted RBP14.28□□□□□ -0.12
NBPF3-201ENST00000318220 ABCF3Q9NUQ8 709 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 PHLPP1O60346 1717 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 SAT1P21673 171 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 PTGISQ16647 500 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 SPATA1Q5VX52 437 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
NBPF3-201ENST00000318220 GPRC5CQ9NQ84 441 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 RAB20Q9NX57 234 aa14.28□□□□□ -0.12
NBPF3-201ENST00000318220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.28□□□□□ -0.12
NBPF3-201ENST00000318220 ALCAMQ13740 583 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 NAA35Q5VZE5 725 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 CYP26C1Q6V0L0 522 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 NKX2-3Q8TAU0 364 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 FAM163AQ96GL9 167 aaPredicted RBP14.27□□□□□ -0.12
NBPF3-201ENST00000318220 ABI2Q9NYB9 513 aaPredicted RBP14.27□□□□□ -0.12
NBPF3-201ENST00000318220 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.27□□□□□ -0.12
NBPF3-201ENST00000318220 V9GYY5 206 aaPredicted RBP14.27□□□□□ -0.12
NBPF3-201ENST00000318220 SPDYE5A6NIY4 337 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 GOLGA8CPA6NN73 597 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 RSPH10BP0C881 870 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 CCNE1P24864 410 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 OTOP2Q7RTS6 562 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 KLHL7Q8IXQ5 586 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 RSAD2Q8WXG1 361 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 GPRASP2Q96D09 838 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 TTC25Q96NG3 672 aa14.27□□□□□ -0.12
NBPF3-201ENST00000318220 POMCP01189 267 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 LRG1P02750 347 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 NR3C1P04150 777 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 SRGAP2BP0DMP2 458 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 SYN1P17600 705 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 ARL4AP40617 200 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 MUM1L1Q5H9M0 696 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 CYP2W1Q8TAV3 490 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 PAGE5Q96GU1 130 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 GMCL1Q96IK5 515 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 ZNF560Q96MR9 790 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 PCDHB12Q9Y5F1 795 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 APC2O95996 2303 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 STXBP3O00186 592 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 MED7O43513 233 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 URODP06132 367 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 NUMBP49757 651 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 TRIM14Q14142 442 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 SHROOM1Q2M3G4 852 aaPredicted RBP14.27□□□□□ -0.13
NBPF3-201ENST00000318220 NOTUMQ6P988 496 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 INTS8Q75QN2 995 aaKnown RBP14.27□□□□□ -0.13
NBPF3-201ENST00000318220 CTAGE3PQ8IX95 158 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 IL25Q9H293 177 aa14.27□□□□□ -0.13
NBPF3-201ENST00000318220 MED1Q15648 1581 aaPredicted RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 A0A087WZ62 844 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 DPCR1Q3MIW9 517 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 ATF7IP2Q5U623 682 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 CAPN12Q6ZSI9 719 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 NUDT18Q6ZVK8 323 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 ERICH1Q86X53 443 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 DHTKD1Q96HY7 919 aaPredicted RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 FDXACB1Q9BRP7 624 aaPredicted RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 RCOR1Q9UKL0 485 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 ODF2LQ9ULJ1 636 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 USP2O75604 605 aaPredicted RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 CATSPERGQ6ZRH7 1159 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 RAD54LQ92698 747 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 RNF19AQ9NV58 838 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 GIPC1O14908 333 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 ALDH1A3P47895 512 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 COASYQ13057 564 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 RPS6KA1Q15418 735 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 AMHR2Q16671 573 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 METTL7BQ6UX53 244 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 KSR1Q8IVT5 923 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 RPUSD2Q8IZ73 545 aaKnown RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 PRPF31Q8WWY3 499 aaKnown RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 RIT2Q99578 217 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 KIAA1586Q9HCI6 787 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 PXMP2Q9NR77 195 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 TMEM63CQ9P1W3 806 aa14.26□□□□□ -0.13
NBPF3-201ENST00000318220 CGNQ9P2M7 1197 aaKnown RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 RGS17Q9UGC6 210 aaPredicted RBP14.26□□□□□ -0.13
NBPF3-201ENST00000318220 A0A1W2PQ27 194 aa14.25□□□□□ -0.13
NBPF3-201ENST00000318220 A0A1W2PQ64 194 aa14.25□□□□□ -0.13
NBPF3-201ENST00000318220 A0A1W2PQD8 194 aa14.25□□□□□ -0.13
NBPF3-201ENST00000318220 MROH2AA6NES4 1674 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms