RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DNAJB1P25685 340 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 CATSPER4Q7RTX7 472 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 TPH2Q8IWU9 490 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 FAM178BQ8IXR5 827 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 LRRC43Q8N309 656 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 DYDC2Q96IM9 177 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 TRAIPQ9BWF2 469 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 DHX33Q9H6R0 707 aaKnown RBP19.85■□□□□ 0.77
TPM1-203ENST00000317516 CWH43Q9H720 699 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 COL4A3BPQ9Y5P4 624 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 XIRP2A4UGR9 3374 aa19.85■□□□□ 0.77
TPM1-203ENST00000317516 BRWD1Q9NSI6 2320 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 NEMFO60524 1076 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 IL9P15248 144 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 PPM1AP35813 382 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 FOSBP53539 338 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 KRT17Q04695 432 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 SPIRE1Q08AE8 756 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 ADAM15Q13444 863 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 CTTNQ14247 550 aaKnown RBP19.84■□□□□ 0.77
TPM1-203ENST00000317516 XKR9Q5GH70 373 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 TWF2Q6IBS0 349 aaKnown RBP19.84■□□□□ 0.77
TPM1-203ENST00000317516 MRPL9Q9BYD2 267 aaKnown RBP19.84■□□□□ 0.77
TPM1-203ENST00000317516 TTC12Q9H892 705 aaPredicted RBP19.84■□□□□ 0.77
TPM1-203ENST00000317516 TLR9Q9NR96 1032 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 WRAP73Q9P2S5 460 aaPredicted RBP19.84■□□□□ 0.77
TPM1-203ENST00000317516 LZTS1Q9Y250 596 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 RALGAPA2Q2PPJ7 1873 aa19.84■□□□□ 0.77
TPM1-203ENST00000317516 REV3LO60673 3130 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 FSD2A1L4K1 749 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 SLITRK3O94933 977 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 IRS1P35568 1242 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 LTBRP36941 435 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 TXKP42681 527 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 PLCB3Q01970 1234 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 CYP4A11Q02928 519 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 KCNT2Q6UVM3 1135 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 SRGAP1Q7Z6B7 1085 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 ZNF598Q86UK7 904 aaKnown RBP19.83■□□□□ 0.77
TPM1-203ENST00000317516 KSR1Q8IVT5 923 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 CCDC83Q8IWF9 413 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 GJD3Q8N144 294 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 PRPF31Q8WWY3 499 aaKnown RBP19.83■□□□□ 0.77
TPM1-203ENST00000317516 TMEM143Q96AN5 459 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 C8orf76Q96K31 380 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 ZNF558Q96NG5 402 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 EIF2AK1Q9BQI3 630 aaKnown RBP19.83■□□□□ 0.77
TPM1-203ENST00000317516 TLE6Q9H808 572 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 SH2B1Q9NRF2 756 aaPredicted RBP19.83■□□□□ 0.77
TPM1-203ENST00000317516 PRKAG3Q9UGI9 489 aa19.83■□□□□ 0.77
TPM1-203ENST00000317516 PIN4Q9Y237 131 aaKnown RBP19.83■□□□□ 0.77
TPM1-203ENST00000317516 BDP1A6H8Y1 2624 aa19.83■□□□□ 0.76
TPM1-203ENST00000317516 TCF20Q9UGU0 1960 aaKnown RBP19.83■□□□□ 0.76
TPM1-203ENST00000317516 CARNS1A5YM72 827 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 SRGAP2CP0DJJ0 459 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 SSTR3P32745 418 aaPredicted RBP19.82■□□□□ 0.76
TPM1-203ENST00000317516 PHKA2P46019 1235 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 NDUFV1P49821 464 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 RAB27AP51159 221 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 HMGN5P82970 282 aaKnown RBP19.82■□□□□ 0.76
TPM1-203ENST00000317516 EFHBQ8N7U6 833 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 ZNF579Q8NAF0 562 aaKnown RBP19.82■□□□□ 0.76
TPM1-203ENST00000317516 MRPS27Q92552 414 aaKnown RBP19.82■□□□□ 0.76
TPM1-203ENST00000317516 CCDC43Q96MW1 224 aaKnown RBP19.82■□□□□ 0.76
TPM1-203ENST00000317516 CDCA3Q99618 268 aaPredicted RBP19.82■□□□□ 0.76
TPM1-203ENST00000317516 HSD17B14Q9BPX1 270 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 IFT122Q9HBG6 1241 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 RNF19AQ9NV58 838 aa19.82■□□□□ 0.76
TPM1-203ENST00000317516 LYPLA2O95372 231 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 GTF2F1P35269 517 aaKnown RBP eCLIP19.81■□□□□ 0.76
TPM1-203ENST00000317516 NRIP1P48552 1158 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 ALDH7A1P49419 539 aaKnown RBP19.81■□□□□ 0.76
TPM1-203ENST00000317516 LAMTOR4Q0VGL1 99 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 MXD4Q14582 209 aaPredicted RBP19.81■□□□□ 0.76
TPM1-203ENST00000317516 EMC2Q15006 297 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 CLLU1OSQ5K130 101 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 LRRC55Q6ZSA7 311 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 RBM23Q86U06 439 aaKnown RBP19.81■□□□□ 0.76
TPM1-203ENST00000317516 FAM184AQ8NB25 1140 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 HELQQ8TDG4 1101 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 PGBD4Q96DM1 585 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 MTMR9Q96QG7 549 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 MTRQ99707 1265 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 ANKEF1Q9NU02 776 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 SPG21Q9NZD8 308 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 CD207Q9UJ71 328 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 MYO7AQ13402 2215 aa19.81■□□□□ 0.76
TPM1-203ENST00000317516 ZNF623O75123 536 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 XRCC6P12956 609 aaKnown RBP eCLIP19.8■□□□□ 0.76
TPM1-203ENST00000317516 ATP2B1P20020 1258 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 RBM25P49756 843 aaKnown RBP19.8■□□□□ 0.76
TPM1-203ENST00000317516 GUCY1B3Q02153 619 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 DLX2Q07687 328 aaPredicted RBP19.8■□□□□ 0.76
TPM1-203ENST00000317516 NCBP1Q09161 790 aaKnown RBP19.8■□□□□ 0.76
TPM1-203ENST00000317516 ST3GAL1Q11201 340 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 GNL2Q13823 731 aaKnown RBP19.8■□□□□ 0.76
TPM1-203ENST00000317516 BMS1Q14692 1282 aaKnown RBP19.8■□□□□ 0.76
TPM1-203ENST00000317516 PCBP1Q15365 356 aaKnown RBP eCLIP19.8■□□□□ 0.76
TPM1-203ENST00000317516 GLB1LQ6UWU2 654 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 ADGRD2Q7Z7M1 963 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms