RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 DENND2CQ68D51 928 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 LRRC57Q8N9N7 239 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 HOOK2Q96ED9 719 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 SH2D3AQ9BRG2 576 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 RAB17Q9H0T7 212 aa16.13■□□□□ 0.17
TFE3-201ENST00000315869 DDX20Q9UHI6 824 aaKnown RBP16.13■□□□□ 0.17
TFE3-201ENST00000315869 LAMB1P07942 1786 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 SYT2Q8N9I0 419 aaPredicted RBP16.12■□□□□ 0.17
TFE3-201ENST00000315869 CEP89Q96ST8 783 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 FAM114A2Q9NRY5 505 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 SWAP70Q9UH65 585 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 CAND2O75155 1236 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 RPA1P27694 616 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 BIRC3Q13489 604 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 CCDC38Q502W7 563 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 CCDC174Q6PII3 467 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 CD302Q8IX05 232 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 GIMAP7Q8NHV1 300 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 SEC16BQ96JE7 1060 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 PSMD1Q99460 953 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 HAUS2Q9NVX0 235 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 TAS2R14Q9NYV8 317 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.12■□□□□ 0.17
TFE3-201ENST00000315869 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 EML1O00423 815 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 RGS16O15492 202 aaPredicted RBP16.12■□□□□ 0.17
TFE3-201ENST00000315869 SNHG28P0DPA3 235 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 SOX5P35711 763 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 CLK2P49760 499 aaKnown RBP16.12■□□□□ 0.17
TFE3-201ENST00000315869 DGKZQ13574 1117 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 NBPF9Q3BBW0 867 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 TMC3Q7Z5M5 1100 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 ACER1Q8TDN7 264 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 DYDC2Q96IM9 177 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 THAP2Q9H0W7 228 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 KCNMB3Q9NPA1 279 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 KLC4Q9NSK0 619 aa16.12■□□□□ 0.17
TFE3-201ENST00000315869 MAST2Q6P0Q8 1798 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 F5H6K3 240 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 ECM2O94769 699 aaPredicted RBP16.11■□□□□ 0.17
TFE3-201ENST00000315869 SPATA31C1P0DKV0 1188 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 KCNA3P22001 575 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 HOXD13P35453 343 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 KLRC3Q07444 240 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 DLGAP5Q15398 846 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 ABCB5Q2M3G0 1257 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 LRIG3Q6UXM1 1119 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 ARHGEF26Q96DR7 871 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 CALR3Q96L12 384 aaKnown RBP16.11■□□□□ 0.17
TFE3-201ENST00000315869 GLT8D2Q9H1C3 349 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 LRRC4CQ9HCJ2 640 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 DNAJC17Q9NVM6 304 aaKnown RBP16.11■□□□□ 0.17
TFE3-201ENST00000315869 MSH4O15457 936 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 LMNB1P20700 586 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 CCDC105Q8IYK2 499 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 OGFOD1Q8N543 542 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 LNX1Q8TBB1 728 aaPredicted RBP16.11■□□□□ 0.17
TFE3-201ENST00000315869 SUCLA2Q9P2R7 463 aaPredicted RBP16.11■□□□□ 0.17
TFE3-201ENST00000315869 GGT7Q9UJ14 662 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 TRAF3IP3Q9Y228 551 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 CD2APQ9Y5K6 639 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 GJA3Q9Y6H8 435 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 CDK5RAP2Q96SN8 1893 aa16.11■□□□□ 0.17
TFE3-201ENST00000315869 MEIS2O14770 477 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
TFE3-201ENST00000315869 LRCH2Q5VUJ6 765 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 PNMA8AQ86V59 439 aaPredicted RBP16.1■□□□□ 0.17
TFE3-201ENST00000315869 RFFLQ8WZ73 363 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 SLITRK6Q9H5Y7 841 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.1■□□□□ 0.17
TFE3-201ENST00000315869 SLC40A1Q9NP59 571 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 UBE2TQ9NPD8 197 aaPredicted RBP16.1■□□□□ 0.17
TFE3-201ENST00000315869 ASTN1O14525 1302 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 IGSF9BQ9UPX0 1349 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
TFE3-201ENST00000315869 SPOPO43791 374 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 SHBGP04278 402 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 ECHS1P30084 290 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 MYL7Q01449 175 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 OTUD6AQ7L8S5 288 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 PALB2Q86YC2 1186 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 SIAH1Q8IUQ4 282 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 SUGP1Q8IWZ8 645 aaKnown RBP16.1■□□□□ 0.17
TFE3-201ENST00000315869 FBXO25Q8TCJ0 367 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 AZI2Q9H6S1 392 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 BAIAP2L1Q9UHR4 511 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 RASAL2Q9UJF2 1139 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 ASTN2O75129 1339 aaPredicted RBP16.1■□□□□ 0.17
TFE3-201ENST00000315869 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 POLD1P28340 1107 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 FMO5P49326 533 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 PPP1R7Q15435 360 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 HOOK3Q86VS8 718 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 CNPY4Q8N129 248 aa16.1■□□□□ 0.17
TFE3-201ENST00000315869 P2RX7Q99572 595 aaKnown RBP16.1■□□□□ 0.17
TFE3-201ENST00000315869 GLIS2Q9BZE0 524 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms