RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 MYO3BQ8WXR4 1341 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 IQANK1A0A1B0GTG1 560 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 FAM187AA6NFU0 413 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 MARK3P27448 753 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 ZNF449Q6P9G9 518 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 RASA4BC9J798 803 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 STXBP3O00186 592 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 RASA4O43374 803 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 CAV1Q03135 178 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 SPARCL1Q14515 664 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 PTPAQ15257 358 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 TUBB6Q9BUF5 446 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 CCDC68Q9H2F9 335 aa14.76□□□□□ -0.05
SPAST-201ENST00000315285 MYMKA6NI61 221 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 HDLBPQ00341 1268 aaKnown RBP14.75□□□□□ -0.05
SPAST-201ENST00000315285 E2F4Q16254 413 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 RBM43Q6ZSC3 357 aaKnown RBP14.75□□□□□ -0.05
SPAST-201ENST00000315285 RUBCNQ92622 972 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 CFAP36Q96G28 342 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 SUGT1Q9Y2Z0 365 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 DAGLAQ9Y4D2 1042 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 PFASO15067 1338 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 EMSYQ7Z589 1322 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 NPHP3-ACAD11A0A0J9YXS1 232 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 SFNP31947 248 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 BEND6Q5SZJ8 279 aaPredicted RBP14.75□□□□□ -0.05
SPAST-201ENST00000315285 FUCA2Q9BTY2 467 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 TMEM60Q9H2L4 133 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 AMACRQ9UHK6 382 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 FBXL5Q9UKA1 691 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 MAPK13O15264 365 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 MMEL1Q495T6 779 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 MMS22LQ6ZRQ5 1243 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 SRRM1Q8IYB3 904 aaKnown RBP14.75□□□□□ -0.05
SPAST-201ENST00000315285 GSDMBQ8TAX9 411 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 PPP1R16BQ96T49 567 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 VIPAS39Q9H9C1 493 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 NGRNQ9NPE2 291 aaKnown RBP14.75□□□□□ -0.05
SPAST-201ENST00000315285 COL3A1P02461 1466 aaPredicted RBP14.75□□□□□ -0.05
SPAST-201ENST00000315285 TOM1L1O75674 476 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 NTSR2O95665 410 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 SRGAP2BP0DMP2 458 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 OSBPP22059 807 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 ARL4CP56559 192 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.75□□□□□ -0.05
SPAST-201ENST00000315285 LRRC4Q9HBW1 653 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 RGL1Q9NZL6 768 aa14.75□□□□□ -0.05
SPAST-201ENST00000315285 KIDINS220Q9ULH0 1771 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 NMT1P30419 496 aaKnown RBP14.74□□□□□ -0.05
SPAST-201ENST00000315285 CDO1Q16878 200 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 PCGF5Q86SE9 256 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 MORC4Q8TE76 937 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 HSPH1Q92598 858 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 SAAL1Q96ER3 474 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 PPP1R3GB7ZBB8 358 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 EPHA7Q15375 998 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 CCDC137Q6PK04 289 aaKnown RBP14.74□□□□□ -0.05
SPAST-201ENST00000315285 NLRP14Q86W24 1093 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 RNPC3Q96LT9 517 aaKnown RBP14.74□□□□□ -0.05
SPAST-201ENST00000315285 WNT8AQ9H1J5 351 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 RASA1P20936 1047 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 CEP55Q53EZ4 464 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 FAM47EQ6ZV65 393 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 SMIM5Q71RC9 77 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 NSUN6Q8TEA1 469 aaKnown RBP14.74□□□□□ -0.05
SPAST-201ENST00000315285 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
SPAST-201ENST00000315285 IPO11Q9UI26 975 aaKnown RBP14.74□□□□□ -0.05
SPAST-201ENST00000315285 CALB1P05937 261 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 PEX19P40855 299 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 PSMC5P62195 406 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 RSRC2Q7L4I2 434 aaKnown RBP14.74□□□□□ -0.05
SPAST-201ENST00000315285 TRIM59Q8IWR1 403 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 RNF146Q9NTX7 359 aa14.74□□□□□ -0.05
SPAST-201ENST00000315285 KIF3CO14782 793 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 TROAPQ12815 778 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 STXBP2Q15833 593 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 RASIP1Q5U651 963 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 HAUS6Q7Z4H7 955 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 CLEC10AQ8IUN9 316 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 PRPF38AQ8NAV1 312 aaKnown RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 TTC13Q8NBP0 860 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 USH1CQ9Y6N9 552 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 PSMD14O00487 310 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 ESRRAP11474 423 aaPredicted RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 NR1H3Q13133 447 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 MAPK6Q16659 721 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 SNRNP48Q6IEG0 339 aaKnown RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 FBXO33Q7Z6M2 555 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 CEP120Q8N960 986 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 TBC1D16Q8TBP0 767 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 MS4A14Q96JA4 679 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 TUFT1Q9NNX1 390 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 VCX3AQ9NNX9 186 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 TECPR2O15040 1411 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 CD163L1Q9NR16 1453 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 SLC16A3O15427 465 aaKnown RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 KRT37O76014 449 aa14.73□□□□□ -0.05
SPAST-201ENST00000315285 THOC1Q96FV9 657 aaKnown RBP14.73□□□□□ -0.05
SPAST-201ENST00000315285 GABBR1Q9UBS5 961 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms