RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 HOOK3Q86VS8 718 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 ERMNQ8TAM6 284 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 CTNNBL1Q8WYA6 563 aaPredicted RBP14.55□□□□□ -0.08
SKA3-202ENST00000314759 ALG3Q92685 438 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 P3H4Q92791 437 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 LENG9Q96B70 501 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.55□□□□□ -0.08
SKA3-202ENST00000314759 DIS3Q9Y2L1 958 aaKnown RBP14.55□□□□□ -0.08
SKA3-202ENST00000314759 MPHOSPH10O00566 681 aaKnown RBP14.55□□□□□ -0.08
SKA3-202ENST00000314759 ATP2B4P23634 1241 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 GBP2P32456 591 aaPredicted RBP14.55□□□□□ -0.08
SKA3-202ENST00000314759 ZDHHC24Q6UX98 284 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 FBXO25Q8TCJ0 367 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 STK33Q9BYT3 514 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 GPR88Q9GZN0 384 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 GLT8D2Q9H1C3 349 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 TAS2R14Q9NYV8 317 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 DNAJC12Q9UKB3 198 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 SNX24Q9Y343 169 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 FAM86B1E9PN63 330 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 TRIM37O94972 964 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 MMEP08473 750 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 FAM86B2P0C5J1 330 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 GHRP10912 638 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 MMP13P45452 471 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 KIAA1755Q5JYT7 1200 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 MOXD1Q6UVY6 613 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 JAMLQ86YT9 394 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 NEK9Q8TD19 979 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 TBC1D22AQ8WUA7 517 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 ATXN2LQ8WWM7 1075 aaKnown RBP14.55□□□□□ -0.08
SKA3-202ENST00000314759 TCP11Q8WWU5 503 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 PGM2Q96G03 612 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 THAP2Q9H0W7 228 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 COG5Q9UP83 839 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 L3MBTL1Q9Y468 752 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 TLDC2A0PJX2 215 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 CCT8L1PA6NM43 557 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 KIAA0391O15091 583 aaKnown RBP14.54□□□□□ -0.08
SKA3-202ENST00000314759 RAD21O60216 631 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 SLC8A1P32418 973 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 IFI35P80217 286 aaPredicted RBP14.54□□□□□ -0.08
SKA3-202ENST00000314759 UBAP2Q5T6F2 1119 aaKnown RBP14.54□□□□□ -0.08
SKA3-202ENST00000314759 AADACL2Q6P093 401 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 PALB2Q86YC2 1186 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 FAM186BQ8IYM0 893 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 CNBD1Q8NA66 436 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 CCDC197Q8NCU1 140 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 ZNF622Q969S3 477 aaKnown RBP eCLIP14.54□□□□□ -0.08
SKA3-202ENST00000314759 THOC1Q96FV9 657 aaKnown RBP14.54□□□□□ -0.08
SKA3-202ENST00000314759 MTFR1LQ9H019 292 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 POLLQ9UGP5 575 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 GOLGA6L10A0A0M3HER8 536 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 TBCAO75347 108 aaKnown RBP14.54□□□□□ -0.08
SKA3-202ENST00000314759 MAPK7Q13164 816 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 SLC29A2Q14542 456 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 PPP2R5EQ16537 467 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 NAP1L3Q99457 506 aaPredicted RBP14.54□□□□□ -0.08
SKA3-202ENST00000314759 SELENOSQ9BQE4 189 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 TMOD4Q9NZQ9 345 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 NRAPQ86VF7 1730 aa14.54□□□□□ -0.08
SKA3-202ENST00000314759 ZMYM2Q9UBW7 1377 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 FAM187AA6NFU0 413 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 SMIM23A6NLE4 172 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 CLTAP09496 248 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 PSMC2P35998 433 aaKnown RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 FMO5P49326 533 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 GTF2IP78347 998 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 Q4G0T1 1027 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 DENND2CQ68D51 928 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 NAIF1Q69YI7 327 aaPredicted RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 PIGWQ7Z7B1 504 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 TAX1BP1Q86VP1 789 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 C18orf8Q96DM3 657 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 RPTORQ8N122 1335 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 AHDC1Q5TGY3 1603 aaPredicted RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 CCDC169A6NNP5 214 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 TBX3O15119 743 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 VCAM1P19320 739 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 NMT1P30419 496 aaKnown RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 DRG2P55039 364 aaKnown RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 MYO1EQ12965 1108 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 DHX34Q14147 1143 aaKnown RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 CBWD6Q4V339 395 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 ZC2HC1CQ53FD0 456 aaPredicted RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 CBWD3Q5JTY5 395 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 CBWD5Q5RIA9 395 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 PNMA8AQ86V59 439 aaPredicted RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 NSMCE1Q8WV22 266 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 RPGRQ92834 1020 aaKnown RBP14.53□□□□□ -0.08
SKA3-202ENST00000314759 SEMA4AQ9H3S1 761 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 AZI2Q9H6S1 392 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 OLFML3Q9NRN5 406 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 GRHL1Q9NZI5 618 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 RGL1Q9NZL6 768 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 FOCADQ5VW36 1801 aa14.53□□□□□ -0.08
SKA3-202ENST00000314759 A0A1B0GUA9 196 aa14.52□□□□□ -0.08
SKA3-202ENST00000314759 SATB1Q01826 763 aa14.52□□□□□ -0.08
SKA3-202ENST00000314759 AP3B2Q13367 1082 aa14.52□□□□□ -0.08
SKA3-202ENST00000314759 COG2Q14746 738 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms