RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CWH43Q9H720 699 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 UPF2Q9HAU5 1272 aaKnown RBP16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 PCDHB7Q9Y5E2 793 aa16.3■□□□□ 0.2
PPP1CA-201ENST00000312989 ARID2Q68CP9 1835 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 ITGB1P05556 798 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 HOXA11P31270 313 aaPredicted RBP16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 ARL2P36404 184 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 TECP42680 631 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 MCM2P49736 904 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 DNM2P50570 870 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.26e-8■■□□□ 11.8
PPP1CA-201ENST00000312989 LAMTOR4Q0VGL1 99 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 IFNLR1Q8IU57 520 aaPredicted RBP16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 PIGOQ8TEQ8 1089 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 PSPC1Q8WXF1 523 aaKnown RBP16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 P2RX5Q93086 422 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 PLVAPQ9BX97 442 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 TUFT1Q9NNX1 390 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 PLAGL2Q9UPG8 496 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 RWDD3Q9Y3V2 267 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 KIAA1671Q9BY89 1806 aa16.29■□□□□ 0.2
PPP1CA-201ENST00000312989 MEIS3P2A8K0S8 358 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 GAS2O43903 313 aaKnown RBP16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 BMP1P13497 986 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 AMHR2Q16671 573 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 OTUD6AQ7L8S5 288 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 IGSF22Q8N9C0 903 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 SPPL3Q8TCT6 385 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 MTRQ99707 1265 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 C11orf84Q9BUA3 381 aaPredicted RBP16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 CHST12Q9NRB3 414 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 AGPAT5Q9NUQ2 364 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 ATG2AQ2TAZ0 1938 aa16.28■□□□□ 0.2
PPP1CA-201ENST00000312989 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 TBKBP1A7MCY6 615 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 DGAT1O75907 488 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 XRCC6P12956 609 aaKnown RBP eCLIP16.27■□□□□ 0.25e-6■■□□□ 11.5
PPP1CA-201ENST00000312989 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 GLRA2P23416 452 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 RPA1P27694 616 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 IRS1P35568 1242 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 PHKA2P46019 1235 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 KCNQ1P51787 676 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 PTGDRQ13258 359 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 CAPSQ13938 189 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 TCEAL5Q5H9L2 206 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 KLHL23Q8NBE8 558 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 SCLT1Q96NL6 688 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 ATP6V0A4Q9HBG4 840 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 ALG13Q9NP73 1137 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 GPRC5CQ9NQ84 441 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 TYW1Q9NV66 732 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 DBR1Q9UK59 544 aaKnown RBP16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 LRFN2Q9ULH4 789 aa16.27■□□□□ 0.2
PPP1CA-201ENST00000312989 SFPQP23246 707 aaKnown RBP eCLIP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 PTENP60484 403 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 MRPS5P82675 430 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 SRGAP1Q7Z6B7 1085 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 EXOC8Q8IYI6 725 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 RNF149Q8NC42 400 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 MMTAG2Q9BU76 263 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 LMAN2LQ9H0V9 348 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 COG5Q9UP83 839 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 PIN4Q9Y237 131 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 FNDC1Q4ZHG4 1894 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 PP2D1A8MPX8 630 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 ZNF623O75123 536 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 SRGAP2CP0DJJ0 459 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 ZSCAN20P17040 1043 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 MBTD1Q05BQ5 628 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 PTPROQ16827 1216 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 TIGD5Q53EQ6 642 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 NAALADL2Q58DX5 795 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 TCP11Q8WWU5 503 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 HLA-CQ95604 372 aa16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 INO80BQ9C086 356 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 NSUN3Q9H649 340 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 UBE2ZQ9H832 354 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-201ENST00000312989 ASAP2O43150 1006 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 B4GALT3O60512 393 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 TSPAN1O60635 241 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 USO1O60763 962 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 EOMESO95936 686 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 LTBRP36941 435 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 PRPHP41219 470 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 ATP2C1P98194 919 aaPredicted RBP16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 HYAL1Q12794 435 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 SKIV2LQ15477 1246 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 MRPL10Q7Z7H8 261 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 COLGALT1Q8NBJ5 622 aa16.25■□□□□ 0.19
PPP1CA-201ENST00000312989 BSNDQ8WZ55 320 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms