RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 SLC30A9Q6PML9 568 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 DHX40Q8IX18 779 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ZBED8Q8IZ13 594 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 RNF25Q96BH1 459 aaPredicted RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PAWRQ96IZ0 340 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ABCF3Q9NUQ8 709 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 SNX2O60749 519 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 DAB1O75553 588 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 GPS1Q13098 491 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 HIC1Q14526 733 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ZNF667Q5HYK9 610 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 TMCO5AQ8N6Q1 288 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 THAP11Q96EK4 314 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 WDR24Q96S15 920 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 IRAK4Q9NWZ3 460 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 SENP1Q9P0U3 644 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ARHGEF37A1IGU5 675 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 SFI1A8K8P3 1242 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 RFX1P22670 979 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 PEX3P56589 373 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 MRPS15P82914 257 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 DGKHQ86XP1 1220 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ZNF473Q8WTR7 871 aaKnown RBP14.57□□□□□ -0.08
CLCN6-201ENST00000312413 NUP85Q9BW27 656 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 HEY1Q9Y5J3 304 aa14.57□□□□□ -0.08
CLCN6-201ENST00000312413 ELF1P32519 619 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 KLC1Q07866 573 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 FBXW10Q5XX13 1052 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 XXYLT1Q8NBI6 393 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLCN6-201ENST00000312413 MTBPQ96DY7 904 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 IL17RAQ96F46 866 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 CXorf56Q9H5V9 222 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 ZNF229Q9UJW7 825 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 A0A1W2PQC6 194 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 GGPS1O95749 300 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 RFX8Q6ZV50 586 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 FRA10AC1Q70Z53 315 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 ABI1Q8IZP0 508 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 WNT8AQ9H1J5 351 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 KIF9Q9HAQ2 790 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 SASH1O94885 1247 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 KRT14P02533 472 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 USP17L8P0C7I0 530 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 FAM98CQ17RN3 349 aaKnown RBP14.56□□□□□ -0.08
CLCN6-201ENST00000312413 CEP55Q53EZ4 464 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 SFR1Q86XK3 245 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 SNX19Q92543 992 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 CCT8L2Q96SF2 557 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 C11orf70Q9BRQ4 267 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 SATB2Q9UPW6 733 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 EIF3HO15372 352 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLCN6-201ENST00000312413 TTC8Q8TAM2 541 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 RMDN2Q96LZ7 410 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 TEX12Q9BXU0 123 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 GCOM2Q9BZD3 368 aaPredicted RBP14.56□□□□□ -0.08
CLCN6-201ENST00000312413 ASPSCR1Q9BZE9 553 aa14.56□□□□□ -0.08
CLCN6-201ENST00000312413 RPAP1Q9BWH6 1393 aaPredicted RBP14.56□□□□□ -0.08
CLCN6-201ENST00000312413 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 TCP11X1B4DZS4 312 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 AGTP01019 485 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 GCLMP48507 274 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 SERPINB10P48595 397 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 PMS1P54277 932 aaKnown RBP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 MED21Q13503 144 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 STAT4Q14765 748 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 MAPRE2Q15555 327 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 DYNLL2Q96FJ2 89 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 EDEM3Q9BZQ6 932 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 SLC13A1Q9BZW2 595 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 KIF17Q9P2E2 1029 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 CFAP43Q8NDM7 1665 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 HLA-DPA1P20036 260 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 IL10P22301 178 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 NCAPHQ15003 741 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 USP6NLQ92738 828 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 COG4Q9H9E3 785 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 DONSONQ9NYP3 566 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 GDF11O95390 407 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 CCDC159P0C7I6 412 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 NSUN2Q08J23 767 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 CUL3Q13618 768 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 RWDD4Q6NW29 188 aaKnown RBP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 PDXDC2PQ6P474 469 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 ALKBH8Q96BT7 664 aaKnown RBP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 USP17L3A6NCW0 530 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 USP17L4A6NCW7 530 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 DEAF1O75398 565 aaPredicted RBP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 PYGLP06737 847 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 CYTH1Q15438 398 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 ZNF394Q53GI3 561 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 USP17L1Q7RTZ2 530 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 STAG2Q8N3U4 1231 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 KIAA1586Q9HCI6 787 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 PAIP2BQ9ULR5 123 aaKnown RBP14.55□□□□□ -0.08
CLCN6-201ENST00000312413 LZTS1Q9Y250 596 aa14.55□□□□□ -0.08
CLCN6-201ENST00000312413 ADGRL2O95490 1459 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms