RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 GMCL1Q96IK5 515 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 BCAS3Q9H6U6 928 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 TDRD3Q9H7E2 651 aaKnown RBP10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 PI4KBQ9UBF8 816 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 TRIM10Q9UDY6 481 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 CAPN11Q9UMQ6 739 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 PRELID1Q9Y255 219 aa10.31□□□□□ -0.76
RBFOX1-201ENST00000311745 ZNF263O14978 683 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 GDF11O95390 407 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 HOXD13P35453 343 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 SCTRP47872 440 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 AARSP49588 968 aaKnown RBP eCLIP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 AMPD2Q01433 879 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 NSUN2Q08J23 767 aaKnown RBP eCLIP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 BTG3Q14201 252 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 COG1Q8WTW3 980 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 DDX12PQ92771 950 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 ZMAT2Q96NC0 199 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 DHX36Q9H2U1 1008 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 ATXN10Q9UBB4 475 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 COL11A1P12107 1806 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 PAPPA2Q9BXP8 1791 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 FAM86B1E9PN63 330 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 AKR1B10O60218 316 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 PEX14O75381 377 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 NDUFB10O96000 172 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 FAM86B2P0C5J1 330 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 LSP1P33241 339 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 MLH1P40692 756 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 PDE4DQ08499 809 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 SLC15A2Q16348 729 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 CERKLQ49MI3 558 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 UNC13DQ70J99 1090 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 CCDC51Q96ER9 411 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 ZBED3Q96IU2 234 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 CCDC17Q96LX7 622 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 AASDHPPTQ9NRN7 309 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 STK17AQ9UEE5 414 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 LRWD1Q9UFC0 647 aa10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 DDX25Q9UHL0 483 aaKnown RBP10.3□□□□□ -0.76
RBFOX1-201ENST00000311745 TIMM44O43615 452 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 MED24O75448 989 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 TMCC1O94876 653 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SPATA31C1P0DKV0 1188 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 ZBTB8BQ8NAP8 495 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SMYD1Q8NB12 490 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 LARP4BQ92615 738 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 MOV10L1Q9BXT6 1211 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 DLGAP2Q9P1A6 1054 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 NPHP3-ACAD11A0A0J9YXS1 232 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 STAT3P40763 770 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SLC12A3P55017 1021 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 PABPC4Q13310 644 aaKnown RBP eCLIP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 TMED1Q13445 227 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SOGA3Q5TF21 947 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 TMEM154Q6P9G4 183 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 NLRP14Q86W24 1093 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 ARL8AQ96BM9 186 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 CNOT6LQ96LI5 555 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 UIMC1Q96RL1 719 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 PSTPIP2Q9H939 334 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 VAV3Q9UKW4 847 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 R3HDM2Q9Y2K5 976 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 LOXHD1Q8IVV2 1947 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 PVALEFA0A1B0GWK0 134 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 F5H6K3 240 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 RFC5P40937 340 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 ECE1P42892 770 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 TNNI2P48788 182 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 TRPC1P48995 793 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 APBA1Q02410 837 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 UBXN1Q04323 297 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 KLRC3Q07444 240 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 KLC1Q07866 573 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SLMAPQ14BN4 828 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SLFN13Q68D06 897 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 THOC7Q6I9Y2 204 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SND1Q7KZF4 910 aaKnown RBP eCLIP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 YTHDF3Q7Z739 585 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 CNGA4Q8IV77 575 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 CCDC63Q8NA47 563 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 ERGIC2Q96RQ1 377 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 TUBGCP2Q9BSJ2 902 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 OSBPL7Q9BZF2 842 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 SLC5A4Q9NY91 659 aa10.29□□□□□ -0.76
RBFOX1-201ENST00000311745 IGLV3-22A0A075B6J6 115 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 TMEM221A6NGB7 291 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 H0YIN7 160 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 FGFR1OPO95684 399 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 HOXD12P35452 270 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 SPAG1Q07617 926 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 FOXR2Q6PJQ5 311 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 LMNTD2Q8IXW0 634 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 SIX5Q8N196 739 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 PURBQ96QR8 312 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 KCTD10Q9H3F6 313 aa10.28□□□□□ -0.76
RBFOX1-201ENST00000311745 KANSL2Q9H9L4 492 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms