RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ARHGEF2Q92974 986 aaKnown RBP15.85■□□□□ 0.13
COL6A2-202ENST00000310645 ARHGEF10LQ9HCE6 1279 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 SIX2Q9NPC8 291 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 CTTNBP2NLQ9P2B4 639 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 ANKIB1Q9P2G1 1089 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 ZNF652Q9Y2D9 606 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 TMEM120BA0PK00 339 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 NR3C1P04150 777 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 LACTBP83111 547 aaPredicted RBP15.85■□□□□ 0.13
COL6A2-202ENST00000310645 CYP4A11Q02928 519 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 ORC2Q13416 577 aaPredicted RBP15.85■□□□□ 0.13
COL6A2-202ENST00000310645 DRAP1Q14919 205 aaPredicted RBP15.85■□□□□ 0.13
COL6A2-202ENST00000310645 TTBK2Q6IQ55 1244 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 COL23A1Q86Y22 540 aaPredicted RBP15.85■□□□□ 0.13
COL6A2-202ENST00000310645 NEDD1Q8NHV4 660 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 SAAL1Q96ER3 474 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 DDX23Q9BUQ8 820 aaKnown RBP15.85■□□□□ 0.13
COL6A2-202ENST00000310645 DHX36Q9H2U1 1008 aaKnown RBP15.85■□□□□ 0.13
COL6A2-202ENST00000310645 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.85■□□□□ 0.131e-7■■■■■ 115.4
COL6A2-202ENST00000310645 HOMER3Q9NSC5 361 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 GRHL1Q9NZI5 618 aa15.85■□□□□ 0.13
COL6A2-202ENST00000310645 LOC102724428A0A0B4J2F2 783 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 ANKRD63C9JTQ0 380 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 MSH2P43246 934 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 SIK1P57059 783 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 IRX1P78414 480 aaPredicted RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 CTNNAL1Q9UBT7 734 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 TBK1Q9UHD2 729 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 A0A0A6YYK5 440 aaPredicted RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 ESYT2A0FGR8 921 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 FAM187AA6NFU0 413 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 CCND1P24385 295 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 ATP11AP98196 1134 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 TAF11Q15544 211 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 CCDC137Q6PK04 289 aaKnown RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 SEPT14Q6ZU15 432 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 SLC35C1Q96A29 364 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 ZBTB10Q96DT7 871 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 POP1Q99575 1024 aaKnown RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 PAIP2Q9BPZ3 127 aaKnown RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 REEP2Q9BRK0 252 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 CARD9Q9H257 536 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 DNAJC12Q9UKB3 198 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 ALG6Q9Y672 507 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 KDM3AQ9Y4C1 1321 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 RIPK2O43353 540 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 CALRP27797 417 aaKnown RBP15.84■□□□□ 0.13
COL6A2-202ENST00000310645 FOXR2Q6PJQ5 311 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 FITM2Q8N6M3 262 aa15.84■□□□□ 0.13
COL6A2-202ENST00000310645 CALUO43852 315 aaPredicted RBP15.83■□□□□ 0.13
COL6A2-202ENST00000310645 GH1P01241 217 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 HOXD13P35453 343 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 MESDQ14696 234 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 TNIP1Q15025 636 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 ANKRD20A2Q5SQ80 823 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 ANKRD20A1Q5TYW2 823 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 ANKRD20A3Q5VUR7 823 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 TTC27Q6P3X3 843 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 ZNF483Q8TF39 744 aaPredicted RBP15.83■□□□□ 0.13
COL6A2-202ENST00000310645 STMN4Q9H169 189 aaPredicted RBP15.83■□□□□ 0.13
COL6A2-202ENST00000310645 RIOX1Q9H6W3 641 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 SPATS2LQ9NUQ6 558 aaKnown RBP15.83■□□□□ 0.13
COL6A2-202ENST00000310645 COG5Q9UP83 839 aa15.83■□□□□ 0.13
COL6A2-202ENST00000310645 ATP2A2P16615 1042 aaKnown RBP15.83■□□□□ 0.12
COL6A2-202ENST00000310645 BTDP43251 543 aa15.83■□□□□ 0.12
COL6A2-202ENST00000310645 DHX34Q14147 1143 aaKnown RBP15.83■□□□□ 0.12
COL6A2-202ENST00000310645 PRELID2Q8N945 189 aa15.83■□□□□ 0.12
COL6A2-202ENST00000310645 RDH13Q8NBN7 331 aa15.83■□□□□ 0.12
COL6A2-202ENST00000310645 IFT74Q96LB3 600 aa15.83■□□□□ 0.12
COL6A2-202ENST00000310645 PLCD4Q9BRC7 762 aa15.83■□□□□ 0.12
COL6A2-202ENST00000310645 PSTPIP2Q9H939 334 aa15.83■□□□□ 0.12
COL6A2-202ENST00000310645 TCRBV7S2A1N4TA0A589 114 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 LMNB1P20700 586 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 SOX5P35711 763 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 NPEPPSP55786 919 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 JAM2P57087 298 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 ZNF746Q6NUN9 644 aaPredicted RBP15.82■□□□□ 0.12
COL6A2-202ENST00000310645 FAM47EQ6ZV65 393 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 SPATA21Q7Z572 469 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 RMDN2Q96LZ7 410 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 ETNK1Q9HBU6 452 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 KCNMB3Q9NPA1 279 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 USP40Q9NVE5 1235 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 SLC5A4Q9NY91 659 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 ADAM22Q9P0K1 906 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 TMEM253P0C7T8 217 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 GRIK3Q13003 919 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 GIT2Q14161 759 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 SHANK3Q9BYB0 1731 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 RNASELQ05823 741 aaKnown RBP15.82■□□□□ 0.12
COL6A2-202ENST00000310645 PPATQ06203 517 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 BNIP1Q12981 228 aa15.82■□□□□ 0.12
COL6A2-202ENST00000310645 TTC7AQ9ULT0 858 aaPredicted RBP15.82■□□□□ 0.12
COL6A2-202ENST00000310645 MPHOSPH10O00566 681 aaKnown RBP15.81■□□□□ 0.12
COL6A2-202ENST00000310645 PPP1R11O60927 126 aaPredicted RBP15.81■□□□□ 0.12
COL6A2-202ENST00000310645 PHF2O75151 1096 aa15.81■□□□□ 0.12
COL6A2-202ENST00000310645 TRIM49P0CI25 452 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms