RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 BATF3Q9NR55 127 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 ANGPT2O15123 496 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 HABP4Q5JVS0 413 aaKnown RBP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 CAPRIN2Q6IMN6 1127 aaKnown RBP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 LZTS3O60299 673 aaPredicted RBP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 ENOSF1Q7L5Y1 443 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 C7orf31Q8N865 590 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 FAM129AQ9BZQ8 928 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 MYH7P12883 1935 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 NLRP11P59045 1033 aaKnown RBP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 PSMC1P62191 440 aaKnown RBP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 GPT2Q8TD30 523 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 SSH3Q8TE77 659 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 NDST4Q9H3R1 872 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 SRPRBQ9Y5M8 271 aaKnown RBP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 ASXL2Q76L83 1435 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 NSUN2Q08J23 767 aaKnown RBP eCLIP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 KSR1Q8IVT5 923 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 GPR108Q9NPR9 543 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 CLIC4Q9Y696 253 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 STXBP3O00186 592 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 TCF3P15923 654 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 BTDP43251 543 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 CLCN6P51797 869 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 ADCK1Q86TW2 530 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 HORMAD1Q86X24 394 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 MFN1Q8IWA4 741 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 UVRAGQ9P2Y5 699 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 ANO9A1A5B4 782 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 PJA2O43164 708 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 LUZP2Q86TE4 346 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 RBBP7Q16576 425 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 SLC10A5Q5PT55 438 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
HCFC1-201ENST00000310441 RASSF3Q86WH2 238 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 B4GALNT2Q8NHY0 566 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 RMDN1Q96DB5 314 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 MSTO1Q9BUK6 570 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
HCFC1-201ENST00000310441 UBXN8O00124 270 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 HAUS5O94927 633 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 LAMC2Q13753 1193 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 CMTM5Q96DZ9 223 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 PDHA1P08559 390 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 HIC1Q14526 733 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 TTLL11Q8NHH1 800 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 SMARCAL1Q9NZC9 954 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 ZNF197O14709 1029 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 PMS1P54277 932 aaKnown RBP16.44■□□□□ 0.22
HCFC1-201ENST00000310441 ZNF804BA4D1E1 1349 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 PNMA6AP0CW24 399 aaPredicted RBP16.44■□□□□ 0.22
HCFC1-201ENST00000310441 ZNF827Q17R98 1081 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 KRCC1Q9NPI7 259 aaPredicted RBP16.44■□□□□ 0.22
HCFC1-201ENST00000310441 TTC37Q6PGP7 1564 aa16.44■□□□□ 0.22
HCFC1-201ENST00000310441 MAP3K13O43283 966 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 HEATR6Q6AI08 1181 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 CATSPER3Q86XQ3 398 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 TSPAN17Q96FV3 270 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 ZFP42Q96MM3 310 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 EMILIN3Q9NT22 766 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 ZNF667Q5HYK9 610 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 MAN1B1Q9UKM7 699 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 PCDHA5Q9Y5H7 936 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 CDC42BPBQ9Y5S2 1711 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 A0A0D9SFI3 127 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 IMPDH2P12268 514 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 DHX34Q14147 1143 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 FAM160B2Q86V87 743 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 URGCPQ8TCY9 931 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 ANAPC7Q9UJX3 599 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 SOWAHDA6NJG2 315 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 RALBP11234 206 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 TP53BP2Q13625 1128 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 CDR2LQ86X02 465 aaPredicted RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 WWP1Q9H0M0 922 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 NXF1Q9UBU9 619 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 IRX1P78414 480 aaPredicted RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 HDLBPQ00341 1268 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 LBRQ14739 615 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 MEI1Q5TIA1 1274 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 PARP9Q8IXQ6 854 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 ZFYVE19Q96K21 471 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 MRPL1Q9BYD6 325 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 CCNE1P24864 410 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 EIF2B5Q13144 721 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 C16orf89Q6UX73 402 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 RAPGEF5Q92565 580 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 EXT2Q93063 718 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 IP6K2Q9UHH9 426 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 ST13P50502 369 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 ALKBH8Q96BT7 664 aaKnown RBP16.43■□□□□ 0.22
HCFC1-201ENST00000310441 NSMCE4AQ9NXX6 385 aa16.43■□□□□ 0.22
HCFC1-201ENST00000310441 TNPO2O14787 897 aaKnown RBP16.42■□□□□ 0.22
HCFC1-201ENST00000310441 RASSF9O75901 435 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 PLA2G4BP0C869 781 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 GPC5P78333 572 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 TMEM35BQ8NCS4 154 aa16.42■□□□□ 0.22
HCFC1-201ENST00000310441 OTUD7AQ8TE49 926 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms