RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 KCNH3Q9ULD8 1083 aa10.09□□□□□ -0.79
PDE4D-201ENST00000309641 PADI3Q9ULW8 664 aa10.09□□□□□ -0.79
PDE4D-201ENST00000309641 COLQQ9Y215 455 aaPredicted RBP10.09□□□□□ -0.79
PDE4D-201ENST00000309641 ADGRA3Q8IWK6 1321 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 MYMKA6NI61 221 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 M0QZ92 97 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 GAS2O43903 313 aaKnown RBP10.08□□□□□ -0.8
PDE4D-201ENST00000309641 DARSP14868 501 aaKnown RBP10.08□□□□□ -0.8
PDE4D-201ENST00000309641 EIF4BP23588 611 aaKnown RBP10.08□□□□□ -0.8
PDE4D-201ENST00000309641 NFX1Q12986 1120 aaKnown RBP10.08□□□□□ -0.8
PDE4D-201ENST00000309641 LONRF3Q496Y0 759 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 DYMQ7RTS9 669 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 TMCO2Q7Z6W1 182 aaPredicted RBP10.08□□□□□ -0.8
PDE4D-201ENST00000309641 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 TCP11Q8WWU5 503 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 IFIH1Q9BYX4 1025 aaKnown RBP10.08□□□□□ -0.8
PDE4D-201ENST00000309641 TMX1Q9H3N1 280 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
PDE4D-201ENST00000309641 A0A1W2PQ27 194 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 A0A1W2PQ64 194 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 A0A1W2PQD8 194 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 LRRIQ4A6NIV6 560 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 MGEA5O60502 916 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 GUCY2CP25092 1073 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 GIT2Q14161 759 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 PRPF38BQ5VTL8 546 aaKnown RBP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 TSHZ1Q6ZSZ6 1077 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 RTN4RL1Q86UN2 441 aaPredicted RBP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 EXOC8Q8IYI6 725 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 LINC01599Q8WXQ3 324 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 DDX12PQ92771 950 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 SERTAD1Q9UHV2 236 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 ST3GAL5Q9UNP4 418 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 FAM237AA0A1B0GTK4 181 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 RPS6KA5O75582 802 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 FGBP02675 491 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 EDN1P05305 212 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 LIG1P18858 919 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 RFC2P35250 354 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 PEX3P56589 373 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 PTENP60484 403 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 MXD4Q14582 209 aaPredicted RBP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 FAM109BQ6ICB4 259 aaPredicted RBP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 SV2BQ7L1I2 683 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 RPUSD2Q8IZ73 545 aaKnown RBP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 IQUBQ8NA54 791 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 MRPS27Q92552 414 aaKnown RBP10.07□□□□□ -0.8
PDE4D-201ENST00000309641 DNAJC19Q96DA6 116 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 ERVK-5Q9HDB9 667 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 KBTBD4Q9NVX7 518 aa10.07□□□□□ -0.8
PDE4D-201ENST00000309641 RPLP2P05387 115 aaKnown RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 BMP8BP34820 402 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 SYKP43405 635 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 AFMP43652 599 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 NPTX2P47972 431 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 DEFB103AP81534 67 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 PAK2Q13177 524 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 ZNF410Q86VK4 478 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 KIFAP3Q92845 792 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 GCOM2Q9BZD3 368 aaPredicted RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 BLZF1Q9H2G9 400 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 ASAP2O43150 1006 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 B4GALT5O43286 388 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 PRPF40AO75400 957 aaKnown RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 ZNF202O95125 648 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 PARNO95453 639 aaKnown RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 KRT18P05783 430 aaKnown RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 MBTD1Q05BQ5 628 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 SNW1Q13573 536 aaKnown RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 CNKSR3Q6P9H4 555 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 CLEC17AQ6ZS10 378 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 TAS1R3Q7RTX0 852 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 CDR2LQ86X02 465 aaPredicted RBP10.06□□□□□ -0.8
PDE4D-201ENST00000309641 TMEM87AQ8NBN3 555 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 FIZ1Q96SL8 496 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 FGFBP2Q9BYJ0 223 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 TRIM9Q9C026 710 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 ZHX3Q9H4I2 956 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 SQORQ9Y6N5 450 aa10.06□□□□□ -0.8
PDE4D-201ENST00000309641 MYH11P35749 1972 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 CCDC169A6NNP5 214 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 ZBBXA8MT70 800 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 GRXCR1A8MXD5 290 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 INO80B-WBP1J3KQ70 363 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 SLC16A4O15374 487 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 NR1I2O75469 434 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 SLFN14P0C7P3 912 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 IBSPP21815 317 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 HOXA11P31270 313 aaPredicted RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 NAMPTP43490 491 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 ZNF131P52739 623 aa10.05□□□□□ -0.8
PDE4D-201ENST00000309641 WDR5P61964 334 aaKnown RBP10.05□□□□□ -0.8
PDE4D-201ENST00000309641 CUL4BQ13620 913 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms