RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KCNH2Q12809 1159 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 FAM102BQ5T8I3 360 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 METTL7BQ6UX53 244 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 HAUS6Q7Z4H7 955 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 CCDC155Q8N6L0 562 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 ZNF397Q8NF99 534 aaPredicted RBP13.02□□□□□ -0.32
TRIM40-205ENST00000307859 AFAP1L1Q8TED9 768 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 SPIRE2Q8WWL2 714 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 ERO1AQ96HE7 468 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 ACCSQ96QU6 501 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 CHP1Q99653 195 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 MMRN2Q9H8L6 949 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 EFCC1Q9HA90 598 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 ZNF302Q9NR11 478 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 CYP26B1Q9NR63 512 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 FAM207AQ9NSI2 230 aaPredicted RBP13.02□□□□□ -0.32
TRIM40-205ENST00000307859 PAXBP1Q9Y5B6 917 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 CUL9Q8IWT3 2517 aa13.02□□□□□ -0.32
TRIM40-205ENST00000307859 AFPP02771 609 aaKnown RBP13.02□□□□□ -0.33
TRIM40-205ENST00000307859 OATP04181 439 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 PEX3P56589 373 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 INHBEP58166 350 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 ETF1P62495 437 aaKnown RBP13.02□□□□□ -0.33
TRIM40-205ENST00000307859 TSR1Q2NL82 804 aaKnown RBP13.02□□□□□ -0.33
TRIM40-205ENST00000307859 TRIM65Q6PJ69 517 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 FAM186BQ8IYM0 893 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 NEK11Q8NG66 645 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 BAP1Q92560 729 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 SLC35C1Q96A29 364 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 PCYT2Q99447 389 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
TRIM40-205ENST00000307859 NIFKQ9BYG3 293 aaKnown RBP13.02□□□□□ -0.33
TRIM40-205ENST00000307859 ATP6V0A4Q9HBG4 840 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 XPNPEP1Q9NQW7 623 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 CEP72Q9P209 647 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 DDX41Q9UJV9 622 aaKnown RBP13.02□□□□□ -0.33
TRIM40-205ENST00000307859 PLAGL2Q9UPG8 496 aa13.02□□□□□ -0.33
TRIM40-205ENST00000307859 ZSWIM8A7E2V4 1837 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 EVPLQ92817 2033 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 ASB14A6NK59 587 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 NOL4O94818 638 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 ARIH2O95376 493 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 GGPS1O95749 300 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 NPTX2P47972 431 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 DMP1Q13316 513 aaPredicted RBP13.01□□□□□ -0.33
TRIM40-205ENST00000307859 CCDC62Q6P9F0 684 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 TRMT1LQ7Z2T5 733 aaKnown RBP13.01□□□□□ -0.33
TRIM40-205ENST00000307859 SYCP3Q8IZU3 236 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 ABRAQ8N0Z2 381 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 MYRIPQ8NFW9 859 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 BSNDQ8WZ55 320 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 KCNN1Q92952 543 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
TRIM40-205ENST00000307859 ZNHIT6Q9NWK9 470 aaKnown RBP13.01□□□□□ -0.33
TRIM40-205ENST00000307859 PHLPP2Q6ZVD8 1323 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 GTPBP10A4D1E9 387 aaKnown RBP13□□□□□ -0.33
TRIM40-205ENST00000307859 SLC16A4O15374 487 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 NDUFA10O95299 355 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 SMTNP53814 917 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
TRIM40-205ENST00000307859 PPP2R5AQ15172 486 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 ZNF792Q3KQV3 632 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 WDR78Q5VTH9 848 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 FAM160B1Q5W0V3 765 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 DPY19L2P1Q6NXN4 242 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 PDXDC1Q6P996 788 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 EEPD1Q7L9B9 569 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 CCDC170Q8IYT3 715 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 ANKRD13CQ8N6S4 541 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 KIF18AQ8NI77 898 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 SEPT1Q8WYJ6 367 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 PARK7Q99497 189 aaKnown RBP13□□□□□ -0.33
TRIM40-205ENST00000307859 LSM14BQ9BX40 385 aaKnown RBP13□□□□□ -0.33
TRIM40-205ENST00000307859 GANQ9H2C0 597 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 PLCB1Q9NQ66 1216 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 FRMD4BQ9Y2L6 1034 aa13□□□□□ -0.33
TRIM40-205ENST00000307859 EPN1Q9Y6I3 576 aaPredicted RBP13□□□□□ -0.33
TRIM40-205ENST00000307859 LGR5O75473 907 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 TCF7P36402 384 aaPredicted RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 CYP2J2P51589 502 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 EMC2Q15006 297 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 TARBP2Q15633 366 aaKnown RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 LY6KQ17RY6 165 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 MTERF2Q49AM1 385 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 DCAF17Q5H9S7 520 aaPredicted RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 CELF3Q5SZQ8 465 aaKnown RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 SYT10Q6XYQ8 523 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 MAP4K3Q8IVH8 894 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 FBXO16Q8IX29 292 aaPredicted RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ACRBPQ8NEB7 543 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 SYN2Q92777 582 aaPredicted RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 ZNF333Q96JL9 665 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 NUCKS1Q9H1E3 243 aaKnown RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 DHX33Q9H6R0 707 aaKnown RBP12.99□□□□□ -0.33
TRIM40-205ENST00000307859 KMT5AQ9NQR1 393 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 EXOC7Q9UPT5 735 aa12.99□□□□□ -0.33
TRIM40-205ENST00000307859 REXO2Q9Y3B8 237 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms