RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 ANKRD40Q6AI12 368 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 POTEEQ6S8J3 1075 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 C11orf96Q7Z7L8 435 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 RIN3Q8TB24 985 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 AMACRQ9UHK6 382 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 MKL2Q9ULH7 1088 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 EIF2AK4Q9P2K8 1649 aaKnown RBP13.48□□□□□ -0.25
USP38-201ENST00000307017 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
USP38-201ENST00000307017 RNF139Q8WU17 664 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 PBKQ96KB5 322 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 RPF1Q9H9Y2 349 aaKnown RBP13.48□□□□□ -0.25
USP38-201ENST00000307017 TRAF3IP3Q9Y228 551 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 MEFVO15553 781 aaPredicted RBP13.48□□□□□ -0.25
USP38-201ENST00000307017 HMBSP08397 361 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
USP38-201ENST00000307017 FASTKD1Q53R41 847 aaKnown RBP13.48□□□□□ -0.25
USP38-201ENST00000307017 C6orf118Q5T5N4 469 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 ALKBH5Q6P6C2 394 aaKnown RBP13.48□□□□□ -0.25
USP38-201ENST00000307017 TAS2R42Q7RTR8 314 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 SYNDIG1Q9H7V2 258 aa13.48□□□□□ -0.25
USP38-201ENST00000307017 YY1P25490 414 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 CARSP49589 748 aaKnown RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 MXI1P50539 228 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 COPS2P61201 443 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 LRRC74AQ0VAA2 488 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 PDXDC2PQ6P474 469 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 SFR1Q86XK3 245 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 UBE4BO95155 1302 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 POTECB2RU33 542 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 GLYCTKQ8IVS8 523 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 RUNDC3BQ96NL0 473 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 OSBPL9Q96SU4 736 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 SERPINI1Q99574 410 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 EGFL8Q99944 293 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 PARVGQ9HBI0 331 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 EFTUD2Q15029 972 aaKnown RBP eCLIP13.47□□□□□ -0.25
USP38-201ENST00000307017 WDR24Q96S15 920 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 UPF3AQ9H1J1 476 aaKnown RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 DMC1Q14565 340 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 TJAP1Q5JTD0 557 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 SYDE2Q5VT97 1194 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 KLC3Q6P597 504 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 SLC7A3Q8WY07 619 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 DPF2Q92785 391 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 MAP4K1Q92918 833 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 LRRC37BQ96QE4 947 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 GLT8D2Q9H1C3 349 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 NEUROG2Q9H2A3 272 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 AS3MTQ9HBK9 375 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 FBXO2Q9UK22 296 aaPredicted RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 OCA2Q04671 838 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 SKIV2LQ15477 1246 aaKnown RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 LRRC1Q9BTT6 524 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 NME5P56597 212 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 ANGPT1Q15389 498 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 IFNEQ86WN2 208 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 C4orf33Q8N1A6 199 aa13.47□□□□□ -0.25
USP38-201ENST00000307017 NAF1Q96HR8 494 aaKnown RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.47□□□□□ -0.25
USP38-201ENST00000307017 PIK3C2GO75747 1445 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 ABCC12Q96J65 1359 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 GRAP2O75791 330 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 TRIM49P0CI25 452 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 TRIM49CP0CI26 452 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 TMEM154Q6P9G4 183 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 TRIML1Q8N9V2 468 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 CPA5Q8WXQ8 436 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 FAM136AQ96C01 138 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 BTBD6Q96KE9 485 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 PIF1Q9H611 641 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 ZFYVE9O95405 1425 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 PTPREP23469 700 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 ADD2P35612 726 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 BNIPLQ7Z465 357 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 RHPN2Q8IUC4 686 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 BHMTQ93088 406 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 CYFIP2Q96F07 1278 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 DHTKD1Q96HY7 919 aaPredicted RBP13.46□□□□□ -0.25
USP38-201ENST00000307017 ZNF341Q9BYN7 854 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 GPATCH8Q9UKJ3 1502 aaKnown RBP13.46□□□□□ -0.25
USP38-201ENST00000307017 UHRF1BP1LA0JNW5 1464 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 AVPR1AP37288 418 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 FUT11Q495W5 492 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 SGO1Q5FBB7 561 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 ZMYM1Q5SVZ6 1142 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 CLMNQ96JQ2 1002 aa13.46□□□□□ -0.25
USP38-201ENST00000307017 GMNCA6NCL1 334 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 E5RI56 91 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 M0QYV0 167 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 SKAP2O75563 359 aaPredicted RBP13.46□□□□□ -0.26
USP38-201ENST00000307017 RWDD2BP57060 319 aa13.46□□□□□ -0.26
USP38-201ENST00000307017 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms