RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 PUS10Q3MIT2 529 aaKnown RBP17.46■□□□□ 0.39
FANCA-201ENST00000305699 TPH2Q8IWU9 490 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 C4orf19Q8IY42 314 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 EXOC8Q8IYI6 725 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
FANCA-201ENST00000305699 COLGALT1Q8NBJ5 622 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 MICAL1Q8TDZ2 1067 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 TMEM143Q96AN5 459 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 PCDHA12Q9UN75 941 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 PPME1Q9Y570 386 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 COL4A3BPQ9Y5P4 624 aa17.46■□□□□ 0.39
FANCA-201ENST00000305699 PLXNA4Q9HCM2 1894 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 IL9P15248 144 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 LAG3P18627 525 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 GTF2F1P35269 517 aaKnown RBP eCLIP17.45■□□□□ 0.38
FANCA-201ENST00000305699 IRS1P35568 1242 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 TXKP42681 527 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 COL19A1Q14993 1142 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 CSPP1Q1MSJ5 1256 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 C8orf34Q49A92 452 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 TWF2Q6IBS0 349 aaKnown RBP17.45■□□□□ 0.38
FANCA-201ENST00000305699 CATSPER4Q7RTX7 472 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 LRRC43Q8N309 656 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 C8orf76Q96K31 380 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 ZSCAN31Q96LW9 406 aaPredicted RBP17.45■□□□□ 0.38
FANCA-201ENST00000305699 TTC12Q9H892 705 aaPredicted RBP17.45■□□□□ 0.38
FANCA-201ENST00000305699 CHST12Q9NRB3 414 aa17.45■□□□□ 0.38
FANCA-201ENST00000305699 PIN4Q9Y237 131 aaKnown RBP17.45■□□□□ 0.38
FANCA-201ENST00000305699 A0A0U1RQF3 1178 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 FGF18O76093 207 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 EOMESO95936 686 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 EMC2Q15006 297 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 CLUL1Q15846 466 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 HELQQ8TDG4 1101 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 PRPF31Q8WWY3 499 aaKnown RBP17.44■□□□□ 0.38
FANCA-201ENST00000305699 PSPC1Q8WXF1 523 aaKnown RBP17.44■□□□□ 0.38
FANCA-201ENST00000305699 CCDC43Q96MW1 224 aaKnown RBP17.44■□□□□ 0.38
FANCA-201ENST00000305699 CASD1Q96PB1 797 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 EIF2AK1Q9BQI3 630 aaKnown RBP17.44■□□□□ 0.38
FANCA-201ENST00000305699 LLPHQ9BRT6 129 aaKnown RBP17.44■□□□□ 0.38
FANCA-201ENST00000305699 DHX33Q9H6R0 707 aaKnown RBP17.44■□□□□ 0.38
FANCA-201ENST00000305699 CWH43Q9H720 699 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 RNF19AQ9NV58 838 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 FAM50BQ9Y247 325 aa17.44■□□□□ 0.38
FANCA-201ENST00000305699 GRXCR2A6NFK2 248 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 WNT7AO00755 349 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 ZBTB39O15060 712 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 SLITRK3O94933 977 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 SRGAP2CP0DJJ0 459 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 SSTR3P32745 418 aaPredicted RBP17.43■□□□□ 0.38
FANCA-201ENST00000305699 MCM7P33993 719 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 LTBRP36941 435 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 UBE3AQ05086 875 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 CLLU1OSQ5K130 101 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 ADGRD2Q7Z7M1 963 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 RBM23Q86U06 439 aaKnown RBP17.43■□□□□ 0.38
FANCA-201ENST00000305699 TCP11Q8WWU5 503 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 TLR9Q9NR96 1032 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 PCDHGC5Q9Y5F6 944 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 ARID2Q68CP9 1835 aa17.43■□□□□ 0.38
FANCA-201ENST00000305699 LINC01565O15544 149 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 GAS2O43903 313 aaKnown RBP17.42■□□□□ 0.38
FANCA-201ENST00000305699 PHKA2P46019 1235 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 NRIP1P48552 1158 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 NDUFV1P49821 464 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 HMGN5P82970 282 aaKnown RBP17.42■□□□□ 0.38
FANCA-201ENST00000305699 LAMTOR4Q0VGL1 99 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 GNL2Q13823 731 aaKnown RBP17.42■□□□□ 0.38
FANCA-201ENST00000305699 CTC1Q2NKJ3 1217 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 LRRC55Q6ZSA7 311 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 FAM178BQ8IXR5 827 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 FAM184AQ8NB25 1140 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 ZNF558Q96NG5 402 aa17.42■□□□□ 0.38
FANCA-201ENST00000305699 SH2B1Q9NRF2 756 aaPredicted RBP17.42■□□□□ 0.38
FANCA-201ENST00000305699 SKIP12755 728 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 ATF7P17544 494 aaPredicted RBP17.41■□□□□ 0.38
FANCA-201ENST00000305699 PBX3P40426 434 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 DLX2Q07687 328 aaPredicted RBP17.41■□□□□ 0.38
FANCA-201ENST00000305699 LONRF3Q496Y0 759 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 KCNT2Q6UVM3 1135 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 ZNF598Q86UK7 904 aaKnown RBP17.41■□□□□ 0.38
FANCA-201ENST00000305699 MTMR9Q96QG7 549 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 KIF2CQ99661 725 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 MTRQ99707 1265 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 TMEM60Q9H2L4 133 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 TLE6Q9H808 572 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 IFT122Q9HBG6 1241 aa17.41■□□□□ 0.38
FANCA-201ENST00000305699 PUF60Q9UHX1 559 aaKnown RBP17.41■□□□□ 0.38
FANCA-201ENST00000305699 POTEMA6NI47 508 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 TBX10O75333 385 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 PPM1AP35813 382 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 RAB27AP51159 221 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 ADAM15Q13444 863 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 SRGAP1Q7Z6B7 1085 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 GJD3Q8N144 294 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 RNF149Q8NC42 400 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 LPPQ93052 612 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 HSD17B14Q9BPX1 270 aa17.4■□□□□ 0.38
FANCA-201ENST00000305699 MRPL9Q9BYD2 267 aaKnown RBP17.4■□□□□ 0.38
FANCA-201ENST00000305699 FAM105AQ9NUU6 356 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms