RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 INTS2Q9H0H0 1204 aaKnown RBP16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 PGK2P07205 417 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 ACTR2P61160 394 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 PRKCEQ02156 737 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 SLC18A3Q16572 532 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 C9orf131Q5VYM1 1079 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 ZNF746Q6NUN9 644 aaPredicted RBP16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 COG1Q8WTW3 980 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 SLC7A3Q8WY07 619 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 EDEM3Q9BZQ6 932 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 COL4A5P29400 1685 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 CDK5RAP2Q96SN8 1893 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 BFSP1Q12934 665 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 RPS6KA1Q15418 735 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 TREML2Q5T2D2 321 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 ADAT2Q7Z6V5 191 aaKnown RBP16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 VSIG10LQ86VR7 867 aa16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 DDX41Q9UJV9 622 aaKnown RBP16.4■□□□□ 0.22
PPP4R4-201ENST00000304338 FRMD3A2A2Y4 597 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 NOL4O94818 638 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 GUCY2CP25092 1073 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.214e-6■□□□□ 10.5
PPP4R4-201ENST00000304338 IFI16Q16666 785 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 PEX26Q7Z412 305 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 MS4A14Q96JA4 679 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 POP1Q99575 1024 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 FAM213AQ9BRX8 229 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 ABCB6Q9NP58 842 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 IRF6O14896 467 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 SLC16A3O15427 465 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 TLR2O60603 784 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 EIF3JO75822 258 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 SSR1P43307 286 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 IGBP1P78318 339 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 KCTD2Q14681 263 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 GSPT2Q8IYD1 628 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 METTL13Q8N6R0 699 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 FAM84AQ96KN4 292 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 PPP1R16BQ96T49 567 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 KCND2Q9NZV8 630 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 SSU72P8A0A1W2PR75 194 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 EVI5O60447 810 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 FERP16591 822 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 LLGL1Q15334 1064 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 CBWD6Q4V339 395 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 CBWD3Q5JTY5 395 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 CBWD5Q5RIA9 395 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 INTS8Q75QN2 995 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 CBWD2Q8IUF1 395 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 RBM46Q8TBY0 533 aaKnown RBP16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 RUFY1Q96T51 708 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 GINM1Q9NU53 330 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 CYP39A1Q9NYL5 469 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 CTTNBP2NLQ9P2B4 639 aa16.39■□□□□ 0.21
PPP4R4-201ENST00000304338 DLG4P78352 724 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 CC2D1AQ6P1N0 951 aaPredicted RBP16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 CATSPERGQ6ZRH7 1159 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 USP37Q86T82 979 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 POLR3FQ9H1D9 316 aaPredicted RBP16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 ACBD3Q9H3P7 528 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 CHORDC1Q9UHD1 332 aaPredicted RBP16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 GINS2Q9Y248 185 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 BZW2Q9Y6E2 419 aaKnown RBP16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 SPDYE16A6NNV3 312 aaPredicted RBP16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 TCP1P17987 556 aaKnown RBP16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 VSNL1P62760 191 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 ZNF571Q7Z3V5 609 aaPredicted RBP16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 SRGAP2CP0DJJ0 459 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 NPTX2P47972 431 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 C8orf74Q6P047 294 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 OSBPL9Q96SU4 736 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 PNKPQ96T60 521 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 ZNF302Q9NR11 478 aa16.38■□□□□ 0.21
PPP4R4-201ENST00000304338 DHX15O43143 795 aaKnown RBP16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 ZSCAN20P17040 1043 aaPredicted RBP16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 CNGA1P29973 690 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 CFAP221Q4G0U5 840 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 NAA35Q5VZE5 725 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 PHLDB2Q86SQ0 1253 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 TRPC6Q9Y210 931 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 EPM2AIP1Q7L775 607 aaPredicted RBP16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 DAW1Q8N136 415 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 ADARB2Q9NS39 739 aaKnown RBP16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 NRXN2Q9P2S2 1712 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 FECHP22830 423 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 CDK17Q00537 523 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 CCDC60Q8IWA6 550 aaPredicted RBP16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 C4orf19Q8IY42 314 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 ZSWIM2Q8NEG5 633 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 GPRASP2Q96D09 838 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 CENPHQ9H3R5 247 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 ATP6V0A4Q9HBG4 840 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 TELO2Q9Y4R8 837 aa16.37■□□□□ 0.21
PPP4R4-201ENST00000304338 K7ERI5 159 aa16.36■□□□□ 0.21
PPP4R4-201ENST00000304338 BRD3Q15059 726 aa16.36■□□□□ 0.21
PPP4R4-201ENST00000304338 ZCCHC17Q9NP64 241 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms