RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CBWD1Q9BRT8 395 aa24.39■■□□□ 1.49
SMAD1-201ENST00000302085 POLR3FQ9H1D9 316 aaPredicted RBP24.39■■□□□ 1.49
SMAD1-201ENST00000302085 PHLPP2Q6ZVD8 1323 aa24.39■■□□□ 1.49
SMAD1-201ENST00000302085 ABL1P00519 1130 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 PLEKP08567 350 aaPredicted RBP24.38■■□□□ 1.49
SMAD1-201ENST00000302085 ACTN1P12814 892 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 PON1P27169 355 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 TCF7P36402 384 aaPredicted RBP24.38■■□□□ 1.49
SMAD1-201ENST00000302085 ARHGAP25P42331 645 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 GNG11P61952 73 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 SNRPFP62306 86 aaKnown RBP24.38■■□□□ 1.49
SMAD1-201ENST00000302085 EMC2Q15006 297 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 WDR24Q96S15 920 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 PLCB1Q9NQ66 1216 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 ARHGAP20Q9P2F6 1191 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 DENND3A2RUS2 1198 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 ASB14A6NK59 587 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 ITGBL1O95965 494 aaPredicted RBP24.38■■□□□ 1.49
SMAD1-201ENST00000302085 GTF2F1P35269 517 aaKnown RBP eCLIP24.38■■□□□ 1.49
SMAD1-201ENST00000302085 TMEM63BQ5T3F8 832 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 FAM160B1Q5W0V3 765 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 RDH13Q8NBN7 331 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 HVCN1Q96D96 273 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 GPR20Q99678 358 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 IRX2Q9BZI1 471 aaPredicted RBP24.38■■□□□ 1.49
SMAD1-201ENST00000302085 DHX33Q9H6R0 707 aaKnown RBP24.38■■□□□ 1.49
SMAD1-201ENST00000302085 PDGFCQ9NRA1 345 aa24.38■■□□□ 1.49
SMAD1-201ENST00000302085 MCM3APO60318 1980 aa24.37■■□□□ 1.49
SMAD1-201ENST00000302085 ANKRD63C9JTQ0 380 aa24.37■■□□□ 1.49
SMAD1-201ENST00000302085 CYLC1P35663 651 aaPredicted RBP24.37■■□□□ 1.49
SMAD1-201ENST00000302085 POLGP54098 1239 aaPredicted RBP24.37■■□□□ 1.49
SMAD1-201ENST00000302085 TARBP2Q15633 366 aaKnown RBP24.37■■□□□ 1.49
SMAD1-201ENST00000302085 EXOC3L4Q17RC7 722 aa24.37■■□□□ 1.49
SMAD1-201ENST00000302085 NRBP2Q9NSY0 501 aa24.37■■□□□ 1.49
SMAD1-201ENST00000302085 EXOC7Q9UPT5 735 aa24.37■■□□□ 1.49
SMAD1-201ENST00000302085 ADGRA3Q8IWK6 1321 aa24.37■■□□□ 1.49
SMAD1-201ENST00000302085 GTPBP10A4D1E9 387 aaKnown RBP24.36■■□□□ 1.49
SMAD1-201ENST00000302085 EIF3CLB5ME19 914 aaKnown RBP24.36■■□□□ 1.49
SMAD1-201ENST00000302085 ADORA2AP29274 412 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 PPP2R5AQ15172 486 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 HSDL1Q3SXM5 330 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 GBP6Q6ZN66 633 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 ARMCX2Q7L311 632 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 GPIHBP1Q8IV16 184 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 MAP4K3Q8IVH8 894 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 ZSWIM2Q8NEG5 633 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 SYN2Q92777 582 aaPredicted RBP24.36■■□□□ 1.49
SMAD1-201ENST00000302085 COPS5Q92905 334 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 TMEM143Q96AN5 459 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 EIF3CQ99613 913 aaKnown RBP24.36■■□□□ 1.49
SMAD1-201ENST00000302085 HSPBP1Q9NZL4 362 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 KLHDC7AQ5VTJ3 777 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 NUCKS1Q9H1E3 243 aaKnown RBP24.36■■□□□ 1.49
SMAD1-201ENST00000302085 SIX2Q9NPC8 291 aa24.36■■□□□ 1.49
SMAD1-201ENST00000302085 TLR2O60603 784 aa24.35■■□□□ 1.49
SMAD1-201ENST00000302085 LGR5O75473 907 aa24.35■■□□□ 1.49
SMAD1-201ENST00000302085 ADSSP30520 456 aa24.35■■□□□ 1.49
SMAD1-201ENST00000302085 EIF4A3P38919 411 aaKnown RBP24.35■■□□□ 1.49
SMAD1-201ENST00000302085 SFMBT2Q5VUG0 894 aa24.35■■□□□ 1.49
SMAD1-201ENST00000302085 DHX37Q8IY37 1157 aaKnown RBP24.35■■□□□ 1.49
SMAD1-201ENST00000302085 XXYLT1Q8NBI6 393 aa24.35■■□□□ 1.49
SMAD1-201ENST00000302085 IFT74Q96LB3 600 aa24.35■■□□□ 1.49
SMAD1-201ENST00000302085 CCDC42Q96M95 316 aa24.35■■□□□ 1.49
SMAD1-201ENST00000302085 STRNO43815 780 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 TRIM49P0CI25 452 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 TRIM49CP0CI26 452 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 TXNP10599 105 aaKnown RBP24.34■■□□□ 1.49
SMAD1-201ENST00000302085 FMO5P49326 533 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 BFSP1Q12934 665 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 HGSNATQ68CP4 663 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 ABRAQ8N0Z2 381 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 ARL2P36404 184 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 KRT83P78385 493 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 ARHGAP29Q52LW3 1261 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 ASAP3Q8TDY4 903 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 SPATA33Q96N06 139 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 PARK7Q99497 189 aaKnown RBP24.34■■□□□ 1.49
SMAD1-201ENST00000302085 AZI2Q9H6S1 392 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 ARHGAP28Q9P2N2 729 aa24.34■■□□□ 1.49
SMAD1-201ENST00000302085 ZNF263O14978 683 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 UCHL3P15374 230 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 CNGA1P29973 690 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 TTLL4Q14679 1199 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 SLC39A4Q6P5W5 647 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 TAS1R3Q7RTX0 852 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 L2HGDHQ9H9P8 463 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 GCNT4Q9P109 453 aa24.33■■□□□ 1.49
SMAD1-201ENST00000302085 DIS3Q9Y2L1 958 aaKnown RBP24.33■■□□□ 1.49
SMAD1-201ENST00000302085 GLRA2P23416 452 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 CASQ1P31415 396 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 RFC5P40937 340 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 HUNKP57058 714 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 CYP27A1Q02318 531 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 CBWD6Q4V339 395 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 CBWD3Q5JTY5 395 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 CBWD5Q5RIA9 395 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 TAPT1Q6NXT6 567 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 SCFD2Q8WU76 684 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 AIPL1Q9NZN9 384 aa24.33■■□□□ 1.48
SMAD1-201ENST00000302085 PLXNB2O15031 1838 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms