RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 ARMC9Q7Z3E5 817 aa22.26■■□□□ 1.15
LTBP3-201ENST00000301873 CCHCR1Q8TD31 782 aa22.26■■□□□ 1.15
LTBP3-201ENST00000301873 PSPC1Q8WXF1 523 aaKnown RBP22.26■■□□□ 1.15
LTBP3-201ENST00000301873 ZNF512BQ96KM6 892 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-201ENST00000301873 TJP3O95049 919 aa22.26■■□□□ 1.15
LTBP3-201ENST00000301873 TROAPQ12815 778 aa22.26■■□□□ 1.15
LTBP3-201ENST00000301873 E2F4Q16254 413 aa22.26■■□□□ 1.15
LTBP3-201ENST00000301873 TBC1D1Q86TI0 1168 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-201ENST00000301873 BEGAINQ9BUH8 593 aa22.26■■□□□ 1.15
LTBP3-201ENST00000301873 E9PCH4 1651 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 OPHN1O60890 802 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 NTSR2O95665 410 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 MMEP08473 750 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 RSPH3Q86UC2 560 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 MYLK4Q86YV6 388 aaPredicted RBP22.25■■□□□ 1.15
LTBP3-201ENST00000301873 GBP5Q96PP8 586 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 LRRC1Q9BTT6 524 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 BAZ2BQ9UIF8 2168 aaKnown RBP22.25■■□□□ 1.15
LTBP3-201ENST00000301873 ARPP19P56211 112 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 PRPSAP1Q14558 356 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 ZNF568Q3ZCX4 644 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 NUP85Q9BW27 656 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 CFAP36Q96G28 342 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 KIAA1586Q9HCI6 787 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 TLK1Q9UKI8 766 aa22.25■■□□□ 1.15
LTBP3-201ENST00000301873 MYO1CO00159 1063 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 RHOBTB3O94955 611 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 PSMC5P62195 406 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 SKA2Q8WVK7 121 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-201ENST00000301873 GJD4Q96KN9 370 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-201ENST00000301873 PITPNM3Q9BZ71 974 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 FIS1Q9Y3D6 152 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 MYO3AQ8NEV4 1616 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 MYO3BQ8WXR4 1341 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 HDLBPQ00341 1268 aaKnown RBP22.24■■□□□ 1.15
LTBP3-201ENST00000301873 RNASELQ05823 741 aaKnown RBP22.24■■□□□ 1.15
LTBP3-201ENST00000301873 TRIM59Q8IWR1 403 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 OVOS2A0A0G2JMS6 1433 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 EYA4O95677 639 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 ZNF699Q32M78 642 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 COG1Q8WTW3 980 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.24■■□□□ 1.155e-7■□□□□ 9.7
LTBP3-201ENST00000301873 SETBP1Q9Y6X0 1596 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 RASA4BC9J798 803 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 RASA4O43374 803 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 EPHA7Q15375 998 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 EDEM3Q9BZQ6 932 aa22.24■■□□□ 1.15
LTBP3-201ENST00000301873 HERC5Q9UII4 1024 aaKnown RBP22.24■■□□□ 1.15
LTBP3-201ENST00000301873 SRGNP10124 158 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 PLS3P13797 630 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 SSTR3P32745 418 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-201ENST00000301873 PEX19P40855 299 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 SNX12Q9UMY4 172 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 ZBTB12Q9Y330 459 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-201ENST00000301873 PDHBP11177 359 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 FBXO33Q7Z6M2 555 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 EVI5O60447 810 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 ZSCAN20P17040 1043 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-201ENST00000301873 TTC17Q96AE7 1141 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 PLEKHG2Q9H7P9 1386 aa22.23■■□□□ 1.15
LTBP3-201ENST00000301873 PDXKO00764 312 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 ARMCX2Q7L311 632 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 MS4A14Q96JA4 679 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 SCAF8Q9UPN6 1271 aaKnown RBP22.22■■□□□ 1.15
LTBP3-201ENST00000301873 MYCP01106 439 aaPredicted RBP22.22■■□□□ 1.15
LTBP3-201ENST00000301873 GCKP35557 465 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 JADE1Q6IE81 842 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 RHPN2Q8IUC4 686 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 ZNF526Q8TF50 670 aaPredicted RBP22.22■■□□□ 1.15
LTBP3-201ENST00000301873 RFFLQ8WZ73 363 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 NOC2LQ9Y3T9 749 aaKnown RBP22.22■■□□□ 1.15
LTBP3-201ENST00000301873 PCDHA10Q9Y5I2 948 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 METTL23Q86XA0 190 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 NBPF3Q9H094 633 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 TAF1DQ9H5J8 278 aaPredicted RBP22.22■■□□□ 1.15
LTBP3-201ENST00000301873 FBXO40Q9UH90 709 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 SFNP31947 248 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 SEMA3FQ13275 785 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 RASIP1Q5U651 963 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 TRIM42Q8IWZ5 723 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 FBXL13Q8NEE6 735 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 FAF2Q96CS3 445 aa22.22■■□□□ 1.15
LTBP3-201ENST00000301873 KIF22Q14807 665 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 C1orf54Q8WWF1 131 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 RBM41Q96IZ5 413 aaKnown RBP22.21■■□□□ 1.15
LTBP3-201ENST00000301873 CYP26A1O43174 497 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 GYPCP04921 128 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 FRMD5Q7Z6J6 570 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 CPSF2Q9P2I0 782 aaKnown RBP22.21■■□□□ 1.15
LTBP3-201ENST00000301873 STXBP3O00186 592 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 SOX5P35711 763 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 RASGRP2Q7LDG7 609 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 LINC00116Q8NCU8 138 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 C7orf25Q9BPX7 421 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 DIS3Q9Y2L1 958 aaKnown RBP22.21■■□□□ 1.15
LTBP3-201ENST00000301873 CNTNAP5Q8WYK1 1306 aa22.21■■□□□ 1.15
LTBP3-201ENST00000301873 GUCY2CP25092 1073 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 KLRK1P26718 216 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 HMGCS2P54868 508 aa22.2■■□□□ 1.14
LTBP3-201ENST00000301873 DSTYKQ6XUX3 929 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms