RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZSWIM2Q8NEG5 633 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 OR2W6PQ8NHA6 318 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 SLC30A5Q8TAD4 765 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 BCAS4Q8TDM0 211 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 ARHGEF26Q96DR7 871 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 STK33Q9BYT3 514 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 CELF4Q9BZC1 486 aaKnown RBP14.01□□□□□ -0.17
HIF3A-204ENST00000300862 CENPHQ9H3R5 247 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 COL20A1Q9P218 1284 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 CHORDC1Q9UHD1 332 aaPredicted RBP14.01□□□□□ -0.17
HIF3A-204ENST00000300862 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 NR2E1Q9Y466 385 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 ECHS1P30084 290 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 COPB2P35606 906 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 FLT3P36888 993 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 LIG3P49916 1009 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 MYL7Q01449 175 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 MAPK7Q13164 816 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 PRPF4BQ13523 1007 aaKnown RBP14.01□□□□□ -0.17
HIF3A-204ENST00000300862 DGKZQ13574 1117 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 DLGAP5Q15398 846 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 PHLDB3Q6NSJ2 640 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 MAATS1Q7Z4T9 603 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 ACTRT1Q8TDG2 376 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 CHURC1Q8WUH1 139 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 CNKSR1Q969H4 720 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.01□□□□□ -0.17
HIF3A-204ENST00000300862 TEKT3Q9BXF9 490 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 WDR11Q9BZH6 1224 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 TAF1DQ9H5J8 278 aaPredicted RBP14.01□□□□□ -0.17
HIF3A-204ENST00000300862 STXBP5LQ9Y2K9 1186 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 MRPL11Q9Y3B7 192 aaKnown RBP14.01□□□□□ -0.17
HIF3A-204ENST00000300862 FAM169AQ9Y6X4 670 aa14.01□□□□□ -0.17
HIF3A-204ENST00000300862 K7ENM7 598 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 FOXN3O00409 490 aaPredicted RBP14□□□□□ -0.17
HIF3A-204ENST00000300862 PLSCR1O15162 318 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 ZEB2O60315 1214 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 ZNF131P52739 623 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 SLFN11Q7Z7L1 901 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 THAP2Q9H0W7 228 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 VCPKMTQ9H867 229 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 DMAC2Q9NW81 257 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 GEMIN8Q9NWZ8 242 aaKnown RBP14□□□□□ -0.17
HIF3A-204ENST00000300862 KCNG1Q9UIX4 513 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 PLAAQ9Y263 795 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 SAMM50Q9Y512 469 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 NFIBO00712 420 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 INPP5BP32019 993 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 CEP85LQ5SZL2 805 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 PADI6Q6TGC4 694 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 CPXCR1Q8N123 301 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 FLAD1Q8NFF5 587 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 SLC20A1Q8WUM9 679 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 TRIM31Q9BZY9 425 aa14□□□□□ -0.17
HIF3A-204ENST00000300862 CNTNAP1P78357 1384 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 EIF3HO15372 352 aaKnown RBP eCLIP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 TTI1O43156 1089 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 DAPK3O43293 454 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 ERLIN2O94905 339 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 FGGP02679 453 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 BFSP1Q12934 665 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 ZNF211Q13398 564 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 WHAMMQ8TF30 809 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 LMBR1Q8WVP7 490 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 FAM151AQ8WW52 585 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 RNPC3Q96LT9 517 aaKnown RBP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 CBWD1Q9BRT8 395 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 MKNK1Q9BUB5 465 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 ISCUQ9H1K1 167 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 ZNF277Q9NRM2 450 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 SUCLA2Q9P2R7 463 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 APEX2Q9UBZ4 518 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 CES2O00748 559 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 TNFAIP3P21580 790 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 GUCY1A3Q02108 690 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 ZNF746Q6NUN9 644 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 RSBN1LQ6PCB5 846 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
HIF3A-204ENST00000300862 MXRA8Q9BRK3 442 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 FAM107BQ9H098 131 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 DPH5Q9H2P9 285 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 KCNH7Q9NS40 1196 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 SEL1LQ9UBV2 794 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 AMFRQ9UKV5 643 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 CCPG1Q9ULG6 757 aa13.99□□□□□ -0.17
HIF3A-204ENST00000300862 EMSYQ7Z589 1322 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 EBAG9O00559 213 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 LMNB1P20700 586 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 HSD17B3P37058 310 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 USP8P40818 1118 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 GCLMP48507 274 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 DCAF12L1Q5VU92 463 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 AADACL2Q6P093 401 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 KCNV1Q6PIU1 500 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 MIER3Q7Z3K6 550 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 KAT5Q92993 513 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 HES6Q96HZ4 224 aa13.98□□□□□ -0.17
HIF3A-204ENST00000300862 UBE2TQ9NPD8 197 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-204ENST00000300862 ODF2LQ9ULJ1 636 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms