RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 C10orf76Q5T2E6 689 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 CCDC137Q6PK04 289 aaKnown RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 ECHDC2Q86YB7 292 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 CCDC65Q8IXS2 484 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 UCMAQ8WVF2 138 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 SEC14L1Q92503 715 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 PWWP2AQ96N64 755 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 CRAMP1Q96RY5 1269 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 PITPNM3Q9BZ71 974 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 STMN4Q9H169 189 aaPredicted RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 BCAS3Q9H6U6 928 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 TAS2R14Q9NYV8 317 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 GRHL1Q9NZI5 618 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 NIP7Q9Y221 180 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNX20-201ENST00000300590 TCRBV7S2A1N4TA0A589 114 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 MEIS1O00470 390 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 AHCYL1O43865 530 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 EPHB2P29323 1055 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 PLS1Q14651 629 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 CWF19L1Q69YN2 538 aaKnown RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 TBC1D16Q8TBP0 767 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 PIGOQ8TEQ8 1089 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 TRIM4Q9C037 500 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 THAP2Q9H0W7 228 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 PFASO15067 1338 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 POTECB2RU33 542 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 BHMG1C9JSJ3 638 aaPredicted RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 LRRN2O75325 713 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 FGRP09769 529 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 IL2RBP14784 551 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 GM2AP17900 193 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 CALB2P22676 271 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 STAT1P42224 750 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 MESDQ14696 234 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 KYNUQ16719 465 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 COBLL1Q53SF7 1204 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 NSUN4Q96CB9 384 aaKnown RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 MYLK2Q9H1R3 596 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 BZW2Q9Y6E2 419 aaKnown RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 ANKRD33BA6NCL7 494 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 CBX6O95503 412 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 EVA1CP58658 441 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 LAMB3Q13751 1172 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 GALNT17Q6IS24 598 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 TTC27Q6P3X3 843 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 PALB2Q86YC2 1186 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 LNX1Q8TBB1 728 aaPredicted RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 CTTNBP2NLQ9P2B4 639 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 DDX3YO15523 660 aaKnown RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 SPAG7O75391 227 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 GNA14O95837 355 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 PTDSS1P48651 473 aaKnown RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 KLC1Q07866 573 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 DNAJC3Q13217 504 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 SETDB1Q15047 1291 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 APBB1IPQ7Z5R6 666 aaPredicted RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 SLFN11Q7Z7L1 901 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 RAB3IPQ96QF0 476 aaPredicted RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 CDC42EP4Q9H3Q1 356 aaKnown RBP11.82□□□□□ -0.52
SNX20-201ENST00000300590 USP40Q9NVE5 1235 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 ADAMTS7Q9UKP4 1686 aa11.82□□□□□ -0.52
SNX20-201ENST00000300590 SFI1A8K8P3 1242 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 RAD21O60216 631 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 UNC5CO95185 931 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 PCP11498 1178 aaKnown RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 PEX5P50542 639 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 USP4Q13107 963 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 CALCOCO2Q13137 446 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 RBM26Q5T8P6 1007 aaKnown RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 ZNF746Q6NUN9 644 aaPredicted RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 VSTM1Q6UX27 236 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 ASRGL1Q7L266 308 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 CPNE8Q86YQ8 564 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 PRELID2Q8N945 189 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 DAGLBQ8NCG7 672 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 DNAJC9Q8WXX5 260 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 NAP1L3Q99457 506 aaPredicted RBP11.81□□□□□ -0.52
SNX20-201ENST00000300590 INTUQ9ULD6 942 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 PCDHA12Q9UN75 941 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 ALG6Q9Y672 507 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 PEX11AO75192 247 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 AKAP3O75969 853 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 ADAMTS2O95450 1211 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 PLA2G4BP0C869 781 aa11.81□□□□□ -0.52
SNX20-201ENST00000300590 TNFAIP3P21580 790 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms