RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ZBTB39O15060 712 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 SPIRE1Q08AE8 756 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 BIRC3Q13489 604 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 SH3BP5LQ7L8J4 393 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 CHMP2AO43633 222 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 AKAP3O75969 853 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 PAEPP09466 180 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 PEX19P40855 299 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 JAG1P78504 1218 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 RUFY4Q6ZNE9 571 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 RNF10Q8N5U6 811 aaKnown RBP16.9■□□□□ 0.3
UBAP1-201ENST00000297661 ETNPPLQ8TBG4 499 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 PIGOQ8TEQ8 1089 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 RUSC1Q9BVN2 902 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 SPATS2LQ9NUQ6 558 aaKnown RBP16.9■□□□□ 0.3
UBAP1-201ENST00000297661 GJA3Q9Y6H8 435 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 GRIN3BO60391 1043 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 LMNB1P20700 586 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 UBXN2AP68543 259 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 ICA1Q05084 483 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
UBAP1-201ENST00000297661 TCP11Q8WWU5 503 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 ARMCX3Q9UH62 379 aaPredicted RBP16.9■□□□□ 0.3
UBAP1-201ENST00000297661 NOVA2Q9UNW9 492 aaKnown RBP16.9■□□□□ 0.3
UBAP1-201ENST00000297661 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
UBAP1-201ENST00000297661 SCN9AQ15858 1988 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 F5H6K3 240 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 KCNK3O14649 394 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 UCHL3P15374 230 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 KLRC3Q07444 240 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 BZW1Q7L1Q6 419 aaKnown RBP16.89■□□□□ 0.29
UBAP1-201ENST00000297661 LENG9Q96B70 501 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 DNM3Q9UQ16 869 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 C15orf41Q9Y2V0 281 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 L3MBTL1Q9Y468 752 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 DCDC2CA8MYV0 355 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 EML1O00423 815 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 GCNT3O95395 438 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 GNA14O95837 355 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 DRD4P21917 467 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 ECHS1P30084 290 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 ERVK-9P63128 1117 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 MEI1Q5TIA1 1274 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 NIM1KQ8IY84 436 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 ISCUQ9H1K1 167 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.89■□□□□ 0.298e-7■■■■□ 24.5
UBAP1-201ENST00000297661 FAM198AQ9UFP1 575 aa16.89■□□□□ 0.29
UBAP1-201ENST00000297661 ZNF541Q9H0D2 1346 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 SMCHD1A6NHR9 2005 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 SBF1O95248 1867 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 CCT8L1PA6NM43 557 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 ANP32DO95626 131 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 CLTAP09496 248 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 PON1P27169 355 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 USP11P51784 963 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 CTTNQ14247 550 aaKnown RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 KNOP1Q1ED39 458 aaKnown RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 CRELD2Q6UXH1 353 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 IRF2BP2Q7Z5L9 587 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 PNMA8AQ86V59 439 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 LRRC45Q96CN5 670 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 AP1M1Q9BXS5 423 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 SPDYE3A6NKU9 549 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 MSH4O15457 936 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 MAGOHP61326 146 aaKnown RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 TNNC1P63316 161 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 CDCA2Q69YH5 1023 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 CCDC63Q8NA47 563 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 SYN2Q92777 582 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 MAGOHBQ96A72 148 aaKnown RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 INPP4AQ96PE3 977 aaPredicted RBP16.88■□□□□ 0.29
UBAP1-201ENST00000297661 AIPL1Q9NZN9 384 aa16.88■□□□□ 0.29
UBAP1-201ENST00000297661 KLHL33A6NCF5 533 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 NDUFB10O96000 172 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 EXOC3L4Q17RC7 722 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 ZC2HC1CQ53FD0 456 aaPredicted RBP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 AGBL2Q5U5Z8 902 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 SLFN12Q8IYM2 578 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 NUCKS1Q9H1E3 243 aaKnown RBP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 DDNO94850 711 aaPredicted RBP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 AFPP02771 609 aaKnown RBP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 XRCC5P13010 732 aaKnown RBP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 ZNF76P36508 570 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 MARSP56192 900 aaKnown RBP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 DPY19L2P1Q6NXN4 242 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 FBXO11Q86XK2 927 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 DDX42Q86XP3 938 aaKnown RBP eCLIP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 CCDC197Q8NCU1 140 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 UBLCP1Q8WVY7 318 aaPredicted RBP16.87■□□□□ 0.29
UBAP1-201ENST00000297661 SH3GL3Q99963 347 aa16.87■□□□□ 0.29
UBAP1-201ENST00000297661 AMNQ9BXJ7 453 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms