RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TNPO2O14787 897 aaKnown RBP5.15□□□□□ -1.59
CSMD3-201ENST00000297405 MT-ND3P03897 115 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 ITGA9Q13797 1035 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 KIAA0825Q8IV33 1275 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 MCUBQ9NWR8 336 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 PHF11Q9UIL8 331 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 RIMS2Q9UQ26 1411 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 TKTP29401 623 aaKnown RBP5.15□□□□□ -1.59
CSMD3-201ENST00000297405 EIF2B2P49770 351 aaKnown RBP5.15□□□□□ -1.59
CSMD3-201ENST00000297405 DR1Q01658 176 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 OCRLQ01968 901 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 ATP13A5Q4VNC0 1218 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 ZNF658Q5TYW1 1059 aaPredicted RBP5.15□□□□□ -1.59
CSMD3-201ENST00000297405 POLNQ7Z5Q5 900 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 MGARPQ8TDB4 240 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 AP3S1Q92572 193 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 EPAS1Q99814 870 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 ZNF556Q9HAH1 456 aa5.15□□□□□ -1.59
CSMD3-201ENST00000297405 CARMIL3Q8ND23 1372 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 FAM45AQ8TCE6 357 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 MRPL11Q9Y3B7 192 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 FAM187AA6NFU0 413 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SMARCA5O60264 1052 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 ZNF12P17014 697 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 CSE1LP55060 971 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 FKBP3Q00688 224 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 B3GNT6Q6ZMB0 384 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SLFN12Q8IYM2 578 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 BBS5Q8N3I7 341 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 CHCHD6Q9BRQ6 235 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 NOL6Q9H6R4 1146 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 COG4Q9H9E3 785 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 FER1L5A0AVI2 2057 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 BTBD11A6QL63 1104 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 STX11O75558 287 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RPS6KB1P23443 525 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 ATXN10Q9UBB4 475 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 ABCA8O94911 1581 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 IFT140Q96RY7 1462 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 KPNA3O00505 521 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 NFIBO00712 420 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 C19orf18Q8NEA5 215 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SYTL5Q8TDW5 730 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 MAML1Q92585 1016 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 KATNAL1Q9BW62 490 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 VCPKMTQ9H867 229 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SOX13Q9UN79 622 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 KIAA1210Q9ULL0 1709 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 MAGEB16A2A368 324 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 CFAP99D6REC4 459 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 CPP00450 1065 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SKIV2L2P42285 1042 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 CLCN2P51788 898 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 ANKLE2Q86XL3 938 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 TGS1Q96RS0 853 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 GAS2O43903 313 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 ECDO95905 644 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 IL15P40933 162 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 CCT2P78371 535 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 DNAJC3Q13217 504 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 STAT4Q14765 748 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 Q4G0T1 1027 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 NFRKBQ6P4R8 1299 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 FAM178BQ8IXR5 827 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 EIF1ADQ8N9N8 165 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 MIGA1Q8NAN2 632 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 FAR2Q96K12 515 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SORCS3Q9UPU3 1222 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SAMM50Q9Y512 469 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RASA4BC9J798 803 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RASA4O43374 803 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 ORC4O43929 436 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 PCNAP12004 261 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 PSMC3P17980 439 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 WARSP23381 471 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 LRPAP1P30533 357 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 MDH1BQ5I0G3 518 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 NELFBQ8WX92 580 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 OSBPL8Q9BZF1 889 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 V9GYQ6 96 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RANBP6O60518 1105 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 APOL3O95236 402 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RALBP11234 206 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 TATP17735 454 aaPredicted RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RASA1P20936 1047 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 PIK3R1P27986 724 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 MAGEA8P43361 318 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 OLFML1Q6UWY5 402 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 C4orf22Q6V702 233 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 EPB41L5Q9HCM4 733 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RBM8AQ9Y5S9 174 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 CEP152O94986 1710 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 SLC26A4O43511 780 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 BCL10O95999 233 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 RINLQ6ZS11 566 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 Q6ZUG5 572 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 DNAAF5Q86Y56 855 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 MAGOHBQ96A72 148 aaKnown RBP5.14□□□□□ -1.59
CSMD3-201ENST00000297405 HAVCR1Q96D42 359 aa5.14□□□□□ -1.59
CSMD3-201ENST00000297405 TUBB1Q9H4B7 451 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms