RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 FUT2Q10981 343 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 LRRC55Q6ZSA7 311 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 ECHDC2Q86YB7 292 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 FBXL16Q8N461 479 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 MRPL43Q8N983 215 aaKnown RBP11.92□□□□□ -0.5
RFC4-201ENST00000296273 KREMEN2Q8NCW0 462 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 CRYGNQ8WXF5 182 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 PPP1R16BQ96T49 567 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 MRPL9Q9BYD2 267 aaKnown RBP11.92□□□□□ -0.5
RFC4-201ENST00000296273 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 AKT3Q9Y243 479 aa11.92□□□□□ -0.5
RFC4-201ENST00000296273 USP34Q70CQ2 3546 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 A0A0U1RQF3 1178 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 H0Y858 1186 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 ALDH7A1P49419 539 aaKnown RBP11.91□□□□□ -0.5
RFC4-201ENST00000296273 CLCN3P51790 818 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 CDC42EP1Q00587 391 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
RFC4-201ENST00000296273 GIT2Q14161 759 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 KLHL40Q2TBA0 621 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 EFCAB12Q6NXP0 572 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 SLC39A11Q8N1S5 342 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 PLCD3Q8N3E9 789 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 CCDC12Q8WUD4 166 aaPredicted RBP11.91□□□□□ -0.5
RFC4-201ENST00000296273 APOL5Q9BWW9 433 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 POMKQ9H5K3 350 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 RNF19AQ9NV58 838 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 SMC3Q9UQE7 1217 aa11.91□□□□□ -0.5
RFC4-201ENST00000296273 ESYT2A0FGR8 921 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 C2orf71A6NGG8 1288 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 C2CD4DB7Z1M9 353 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 SP100P23497 879 aaPredicted RBP11.9□□□□□ -0.5
RFC4-201ENST00000296273 JAKMIP3Q5VZ66 844 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 ZDHHC14Q8IZN3 488 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 LINC01465Q8N7H1 131 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 TMEM87AQ8NBN3 555 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 TMEM169Q96HH4 297 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 ZMYND12Q9H0C1 365 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 ADAMTS10Q9H324 1103 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 NRBP2Q9NSY0 501 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 DZANK1Q9NVP4 752 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 GABBR1Q9UBS5 961 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 USTQ9Y2C2 406 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 SAMM50Q9Y512 469 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 IRAK3Q9Y616 596 aa11.9□□□□□ -0.5
RFC4-201ENST00000296273 CCDC196A0A1B0GTZ2 297 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 GOLGA8AA7E2F4 631 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 GOLGA8BA8MQT2 603 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 WDR64B1ANS9 1081 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 CLASP2O75122 1294 aaKnown RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 MBD3O95983 291 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 PDGFBP01127 241 aaPredicted RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 GNA11P29992 359 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 PBX3P40426 434 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 NBL1P41271 181 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 GPC3P51654 580 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 EXOSC10Q01780 885 aaKnown RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 PFKFB3Q16875 520 aaPredicted RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 ATAT1Q5SQI0 421 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 KIAA1841Q6NSI8 718 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 DHX32Q7L7V1 743 aaKnown RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 TRMT1LQ7Z2T5 733 aaKnown RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 REXO1Q8N1G1 1221 aaKnown RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 TDRD5Q8NAT2 981 aaKnown RBP11.89□□□□□ -0.51
RFC4-201ENST00000296273 C6orf50Q9HD87 102 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 CHST12Q9NRB3 414 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 KIF3AQ9Y496 699 aa11.89□□□□□ -0.51
RFC4-201ENST00000296273 CXCL14O95715 111 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 OATP04181 439 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 SKIP12755 728 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 DARSP14868 501 aaKnown RBP11.88□□□□□ -0.51
RFC4-201ENST00000296273 NCLP19338 710 aaKnown RBP11.88□□□□□ -0.51
RFC4-201ENST00000296273 SFNP31947 248 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 CIITAP33076 1130 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 CA8P35219 290 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 METAP2P50579 478 aaKnown RBP eCLIP11.88□□□□□ -0.51
RFC4-201ENST00000296273 CLCN5P51795 746 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 POLGP54098 1239 aaPredicted RBP11.88□□□□□ -0.51
RFC4-201ENST00000296273 BCAR1P56945 870 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 ASTLQ6HA08 431 aaPredicted RBP11.88□□□□□ -0.51
RFC4-201ENST00000296273 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
RFC4-201ENST00000296273 LRRC71Q8N4P6 559 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 RNF169Q8NCN4 708 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 HELQQ8TDG4 1101 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 SCLT1Q96NL6 688 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 LLPHQ9BRT6 129 aaKnown RBP11.88□□□□□ -0.51
RFC4-201ENST00000296273 TRAIPQ9BWF2 469 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 ZBP1Q9H171 429 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 MFSD1Q9H3U5 465 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
RFC4-201ENST00000296273 BRPF3Q9ULD4 1205 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 EVPLQ92817 2033 aa11.88□□□□□ -0.51
RFC4-201ENST00000296273 KLF18A0A0U1RQI7 1052 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
RFC4-201ENST00000296273 CTSAP10619 480 aa11.87□□□□□ -0.51
RFC4-201ENST00000296273 CDC27P30260 824 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms