RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 FGFR4P22455 802 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 IL9RQ01113 521 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 COASYQ13057 564 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 ADAMTS13Q76LX8 1427 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 PALM2Q8IXS6 379 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 KIF2BQ8N4N8 673 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 CYFIP2Q96F07 1278 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 KCNH4Q9UQ05 1017 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 STK10O94804 968 aaKnown RBP14.42□□□□□ -0.1
HPS3-201ENST00000296051 CA4P22748 312 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 PMS1P54277 932 aaKnown RBP14.42□□□□□ -0.1
HPS3-201ENST00000296051 CASC4Q6P4E1 433 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 METTL23Q86XA0 190 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 CEMIPQ8WUJ3 1361 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 PLEKHG2Q9H7P9 1386 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 CCL15-CCL14A0A0B4J2E2 113 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 NPHP3-ACAD11A0A0J9YXS1 232 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 GYS1P13807 737 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 TBX2Q13207 712 aaPredicted RBP14.41□□□□□ -0.1
HPS3-201ENST00000296051 TTLL4Q14679 1199 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 CCL15Q16663 113 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 GEN1Q17RS7 908 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 CLEC10AQ8IUN9 316 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 GSDMBQ8TAX9 411 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 CCDC110Q8TBZ0 833 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 TMEM39BQ9GZU3 492 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 SLC40A1Q9NP59 571 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 CHORDC1Q9UHD1 332 aaPredicted RBP14.41□□□□□ -0.1
HPS3-201ENST00000296051 OATP04181 439 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 C6orf222P0C671 652 aaPredicted RBP14.41□□□□□ -0.1
HPS3-201ENST00000296051 PSMC2P35998 433 aaKnown RBP14.41□□□□□ -0.1
HPS3-201ENST00000296051 SFR1Q86XK3 245 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 CCDC89Q8N998 374 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 PITPNM3Q9BZ71 974 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 ETNK1Q9HBU6 452 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 ANAPC5Q9UJX4 755 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 DNAJC12Q9UKB3 198 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 RAB21Q9UL25 225 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 MAP2K7O14733 419 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 PIK3CAP42336 1068 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 RAB3IL1Q8TBN0 382 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 DCAF4Q8WV16 495 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 ACAD9Q9H845 621 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 ZNF70Q9UC06 446 aaPredicted RBP14.41□□□□□ -0.1
HPS3-201ENST00000296051 NEXMIFQ5QGS0 1516 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 POTEFA5A3E0 1075 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 GOLGA8IPA6NC78 632 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 GOLGA8JA6NMD2 632 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 DIAPH2O60879 1101 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 POTEIP0CG38 1075 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 GNAT1P11488 350 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 EIF3BP55884 814 aaKnown RBP14.41□□□□□ -0.1
HPS3-201ENST00000296051 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 POTEEQ6S8J3 1075 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 SEC16BQ96JE7 1060 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.41□□□□□ -0.1
HPS3-201ENST00000296051 PCDHA6Q9UN73 950 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 PCDHA8Q9Y5H6 950 aa14.41□□□□□ -0.1
HPS3-201ENST00000296051 PTPRUQ92729 1446 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 PDE6CP51160 858 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 PMS2P54278 862 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 COG2Q14746 738 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 C6orf118Q5T5N4 469 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 FBXO41Q8TF61 875 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 SNX25Q9H3E2 840 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 MYOZ2Q9NPC6 264 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 DBR1Q9UK59 544 aaKnown RBP14.4□□□□□ -0.1
HPS3-201ENST00000296051 MYBL2P10244 700 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 MSH2P43246 934 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 ITKQ08881 620 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 PTGISQ16647 500 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 GUF1Q8N442 669 aaKnown RBP14.4□□□□□ -0.1
HPS3-201ENST00000296051 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
HPS3-201ENST00000296051 MYCBPAPQ8TBZ2 947 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 SH3BP5O60239 455 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 PSMC4P43686 418 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 SNAPC2Q13487 334 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 RBBP5Q15291 538 aaKnown RBP14.4□□□□□ -0.1
HPS3-201ENST00000296051 CDKAL1Q5VV42 579 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 PXDNLA1KZ92 1463 aa14.4□□□□□ -0.1
HPS3-201ENST00000296051 MYMKA6NI61 221 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 GLI1P08151 1106 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 VEGFAP15692 232 aaPredicted RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 MAPK4P31152 587 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 QRICH1Q2TAL8 776 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 RFX8Q6ZV50 586 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 ANKRD36BP1Q96IX9 119 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 PRMT1Q99873 361 aaKnown RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 DENND3A2RUS2 1198 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 hCG_1984214I3L0E3 225 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 RHOBTB3O94955 611 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 TRIM49P0CI25 452 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 TRIM49CP0CI26 452 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 SLC9A1P19634 815 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 KCNB1Q14721 858 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 ARHGEF18Q6ZSZ5 1173 aa14.39□□□□□ -0.11
HPS3-201ENST00000296051 ZNF713Q8N859 430 aaPredicted RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 GIMAP8Q8ND71 665 aaPredicted RBP14.39□□□□□ -0.11
HPS3-201ENST00000296051 HAUS1Q96CS2 278 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms