RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 KCNH2Q12809 1159 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 CRHR2Q13324 411 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 ACVR2BQ13705 512 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 FAM186BQ8IYM0 893 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 MSL3Q8N5Y2 521 aaKnown RBP25.05■■□□□ 1.6
PTX3-201ENST00000295927 ATP8B4Q8TF62 1192 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 BORCS6Q96GS4 357 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 MKNK1Q9BUB5 465 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 CGNQ9P2M7 1197 aaKnown RBP25.05■■□□□ 1.6
PTX3-201ENST00000295927 LUC7L2Q9Y383 392 aaKnown RBP25.05■■□□□ 1.6
PTX3-201ENST00000295927 ADGRA3Q8IWK6 1321 aa25.05■■□□□ 1.6
PTX3-201ENST00000295927 TISP43B9A030 160 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 MYBPC2Q14324 1141 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 PLCB4Q15147 1175 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 FIGNQ5HY92 759 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 E4F1Q66K89 784 aaPredicted RBP25.04■■□□□ 1.6
PTX3-201ENST00000295927 PPME1Q9Y570 386 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 USP27XA6NNY8 438 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 XRCC5P13010 732 aaKnown RBP25.04■■□□□ 1.6
PTX3-201ENST00000295927 ARL2P36404 184 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 SLC26A2P50443 739 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 PPP2R3AQ06190 1150 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 GRM1Q13255 1194 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 MAP4K3Q8IVH8 894 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 EMID1Q96A84 441 aaPredicted RBP25.04■■□□□ 1.6
PTX3-201ENST00000295927 NAA15Q9BXJ9 866 aaKnown RBP25.04■■□□□ 1.6
PTX3-201ENST00000295927 MMRN2Q9H8L6 949 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 KCND1Q9NSA2 647 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 ZHX1Q9UKY1 873 aaPredicted RBP25.04■■□□□ 1.6
PTX3-201ENST00000295927 EXOC7Q9UPT5 735 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 FRMD4BQ9Y2L6 1034 aa25.04■■□□□ 1.6
PTX3-201ENST00000295927 MAFO75444 373 aaPredicted RBP25.03■■□□□ 1.6
PTX3-201ENST00000295927 KCNMA1Q12791 1236 aa25.03■■□□□ 1.6
PTX3-201ENST00000295927 C12orf56Q8IXR9 622 aa25.03■■□□□ 1.6
PTX3-201ENST00000295927 CCAR2Q8N163 923 aaKnown RBP25.03■■□□□ 1.6
PTX3-201ENST00000295927 PPTC7Q8NI37 304 aa25.03■■□□□ 1.6
PTX3-201ENST00000295927 ASAP3Q8TDY4 903 aa25.03■■□□□ 1.6
PTX3-201ENST00000295927 TMEM174Q8WUU8 243 aa25.03■■□□□ 1.6
PTX3-201ENST00000295927 FECHP22830 423 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 SNRPFP62306 86 aaKnown RBP25.02■■□□□ 1.6
PTX3-201ENST00000295927 PAXIP1Q6ZW49 1069 aaPredicted RBP25.02■■□□□ 1.6
PTX3-201ENST00000295927 USP6NLQ92738 828 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 IQCDQ96DY2 449 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 FAM207AQ9NSI2 230 aaPredicted RBP25.02■■□□□ 1.6
PTX3-201ENST00000295927 AGPAT5Q9NUQ2 364 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 ARHGAP28Q9P2N2 729 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 KCNG1Q9UIX4 513 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 A0A1W2PQJ5 194 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 ZBTB42B2RXF5 422 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 EXOC3O60645 756 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 AFPP02771 609 aaKnown RBP25.02■■□□□ 1.6
PTX3-201ENST00000295927 HOXC6P09630 235 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 SMPD1P17405 629 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 GLRA2P23416 452 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 DUSP28Q4G0W2 176 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 DCAF17Q5H9S7 520 aaPredicted RBP25.02■■□□□ 1.6
PTX3-201ENST00000295927 CYP4F22Q6NT55 531 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 OR8K1Q8NGG5 319 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 AFG1LQ8WV93 481 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 CBWD1Q9BRT8 395 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 PCIF1Q9H4Z3 704 aa25.02■■□□□ 1.6
PTX3-201ENST00000295927 TRMT1Q9NXH9 659 aaKnown RBP25.02■■□□□ 1.6
PTX3-201ENST00000295927 TCERG1LQ5VWI1 586 aa25.01■■□□□ 1.59
PTX3-201ENST00000295927 IQSEC1Q6DN90 963 aa25.01■■□□□ 1.59
PTX3-201ENST00000295927 SLC35C1Q96A29 364 aa25.01■■□□□ 1.59
PTX3-201ENST00000295927 DNAJC7Q99615 494 aa25.01■■□□□ 1.59
PTX3-201ENST00000295927 ERAP1Q9NZ08 941 aa25.01■■□□□ 1.59
PTX3-201ENST00000295927 FLRT1Q9NZU1 646 aa25.01■■□□□ 1.59
PTX3-201ENST00000295927 H0YCG3 227 aa25■■□□□ 1.59
PTX3-201ENST00000295927 EPHB6O15197 1021 aa25■■□□□ 1.59
PTX3-201ENST00000295927 LGALS2P05162 132 aa25■■□□□ 1.59
PTX3-201ENST00000295927 NAMPTP43490 491 aa25■■□□□ 1.59
PTX3-201ENST00000295927 ZBED6P86452 979 aa25■■□□□ 1.59
PTX3-201ENST00000295927 TRPC6Q9Y210 931 aa25■■□□□ 1.59
PTX3-201ENST00000295927 MGAMO43451 1857 aa25■■□□□ 1.59
PTX3-201ENST00000295927 SOWAHDA6NJG2 315 aa25■■□□□ 1.59
PTX3-201ENST00000295927 ANKRD63C9JTQ0 380 aa25■■□□□ 1.59
PTX3-201ENST00000295927 CA12O43570 354 aa25■■□□□ 1.59
PTX3-201ENST00000295927 TOMM70O94826 608 aa25■■□□□ 1.59
PTX3-201ENST00000295927 SIP14410 1827 aa25■■□□□ 1.59
PTX3-201ENST00000295927 PPP2R5AQ15172 486 aa25■■□□□ 1.59
PTX3-201ENST00000295927 TAS1R3Q7RTX0 852 aa25■■□□□ 1.59
PTX3-201ENST00000295927 HSPBP1Q9NZL4 362 aa25■■□□□ 1.59
PTX3-201ENST00000295927 HBP1O60381 514 aa24.99■■□□□ 1.59
PTX3-201ENST00000295927 ABCD1P33897 745 aa24.99■■□□□ 1.59
PTX3-201ENST00000295927 RDH13Q8NBN7 331 aa24.99■■□□□ 1.59
PTX3-201ENST00000295927 NEK11Q8NG66 645 aa24.99■■□□□ 1.59
PTX3-201ENST00000295927 CRACR2AQ9BSW2 395 aa24.99■■□□□ 1.59
PTX3-201ENST00000295927 RNPEPQ9H4A4 650 aa24.99■■□□□ 1.59
PTX3-201ENST00000295927 GJD2Q9UKL4 321 aa24.99■■□□□ 1.59
PTX3-201ENST00000295927 CYP2B6P20813 491 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 CNGA1P29973 690 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 DRP2Q13474 957 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 MTF1Q14872 753 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 CCL14Q16627 93 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 PRAMEF19Q5SWL8 479 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 TMTC1Q8IUR5 882 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 EXOC8Q8IYI6 725 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 XXYLT1Q8NBI6 393 aa24.98■■□□□ 1.59
PTX3-201ENST00000295927 LRRIQ4A6NIV6 560 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms