RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 CDHR5Q9HBB8 845 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 IFT122Q9HBG6 1241 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 KCNG1Q9UIX4 513 aa25.01■■□□□ 1.59
LINC01116-201ENST00000295549 AFMP43652 599 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 CAPSQ13938 189 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 FBXO47Q5MNV8 452 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 RNF149Q8NC42 400 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 BSNDQ8WZ55 320 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 SCLYQ96I15 445 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 NLRP4Q96MN2 994 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 PPP1R16BQ96T49 567 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 GINS2Q9Y248 185 aa25■■□□□ 1.59
LINC01116-201ENST00000295549 A0A087WZ62 844 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 SFI1A8K8P3 1242 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 SRGAP2CP0DJJ0 459 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 PLS3P13797 630 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 EIF4BP23588 611 aaKnown RBP24.99■■□□□ 1.59
LINC01116-201ENST00000295549 NAMPTP43490 491 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 CACNB1Q02641 598 aaPredicted RBP24.99■■□□□ 1.59
LINC01116-201ENST00000295549 GPNMBQ14956 572 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 USP38Q8NB14 1042 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 SCLT1Q96NL6 688 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 OSMRQ99650 979 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 FDXACB1Q9BRP7 624 aaPredicted RBP24.99■■□□□ 1.59
LINC01116-201ENST00000295549 NTPCRQ9BSD7 190 aaKnown RBP24.99■■□□□ 1.59
LINC01116-201ENST00000295549 GCOM2Q9BZD3 368 aaPredicted RBP24.99■■□□□ 1.59
LINC01116-201ENST00000295549 PARVGQ9HBI0 331 aa24.99■■□□□ 1.59
LINC01116-201ENST00000295549 LARSQ9P2J5 1176 aaKnown RBP24.99■■□□□ 1.59
LINC01116-201ENST00000295549 FRMD3A2A2Y4 597 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 KINO60870 393 aaKnown RBP24.98■■□□□ 1.59
LINC01116-201ENST00000295549 NBNO60934 754 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 TBCAO75347 108 aaKnown RBP24.98■■□□□ 1.59
LINC01116-201ENST00000295549 FAM13AO94988 1023 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 CXCL10P02778 98 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 DARSP14868 501 aaKnown RBP24.98■■□□□ 1.59
LINC01116-201ENST00000295549 MCM4P33991 863 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 PTENP60484 403 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 DMP1Q13316 513 aaPredicted RBP24.98■■□□□ 1.59
LINC01116-201ENST00000295549 IFNLR1Q8IU57 520 aaPredicted RBP24.98■■□□□ 1.59
LINC01116-201ENST00000295549 ELOA2Q8IYF1 753 aaPredicted RBP24.98■■□□□ 1.59
LINC01116-201ENST00000295549 TMEM40Q8WWA1 233 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 SPIRE2Q8WWL2 714 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 BADQ92934 168 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 ZNF668Q96K58 619 aaPredicted RBP24.98■■□□□ 1.59
LINC01116-201ENST00000295549 DACT1Q9NYF0 836 aa24.98■■□□□ 1.59
LINC01116-201ENST00000295549 PHKA2P46019 1235 aa24.97■■□□□ 1.59
LINC01116-201ENST00000295549 NPTX2P47972 431 aa24.97■■□□□ 1.59
LINC01116-201ENST00000295549 PEX3P56589 373 aa24.97■■□□□ 1.59
LINC01116-201ENST00000295549 LPIN1Q14693 890 aa24.97■■□□□ 1.59
LINC01116-201ENST00000295549 SRGAP1Q7Z6B7 1085 aa24.97■■□□□ 1.59
LINC01116-201ENST00000295549 GRAMD1CQ8IYS0 662 aa24.97■■□□□ 1.59
LINC01116-201ENST00000295549 INO80BQ9C086 356 aaPredicted RBP24.97■■□□□ 1.59
LINC01116-201ENST00000295549 GTPBP6O43824 516 aaPredicted RBP24.96■■□□□ 1.59
LINC01116-201ENST00000295549 CSF2RAP15509 400 aa24.96■■□□□ 1.59
LINC01116-201ENST00000295549 SMTNP53814 917 aa24.96■■□□□ 1.59
LINC01116-201ENST00000295549 MDM2Q00987 491 aaPredicted RBP24.96■■□□□ 1.59
LINC01116-201ENST00000295549 CUL4BQ13620 913 aa24.96■■□□□ 1.59
LINC01116-201ENST00000295549 CDCA2Q69YH5 1023 aaPredicted RBP24.96■■□□□ 1.59
LINC01116-201ENST00000295549 TSHZ1Q6ZSZ6 1077 aa24.96■■□□□ 1.59
LINC01116-201ENST00000295549 LBHD1Q9BQE6 289 aaPredicted RBP24.96■■□□□ 1.59
LINC01116-201ENST00000295549 OSBPL7Q9BZF2 842 aa24.96■■□□□ 1.59
LINC01116-201ENST00000295549 SEL1LQ9UBV2 794 aa24.96■■□□□ 1.59
LINC01116-201ENST00000295549 LRRIQ4A6NIV6 560 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 GHRP10912 638 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 GAP43P17677 238 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 ASIC1P78348 528 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 FPGSQ05932 587 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 PPIGQ13427 754 aaKnown RBP eCLIP24.95■■□□□ 1.59
LINC01116-201ENST00000295549 ODR4Q5SWX8 454 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 RPUSD2Q8IZ73 545 aaKnown RBP24.95■■□□□ 1.59
LINC01116-201ENST00000295549 MYCT1Q8N699 235 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 VWCEQ96DN2 955 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 BLZF1Q9H2G9 400 aa24.95■■□□□ 1.59
LINC01116-201ENST00000295549 NOC2LQ9Y3T9 749 aaKnown RBP24.95■■□□□ 1.59
LINC01116-201ENST00000295549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.95■■□□□ 1.58
LINC01116-201ENST00000295549 PVALEFA0A1B0GWK0 134 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 RPS6KA5O75582 802 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 PFKMP08237 780 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 IDEP14735 1019 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 PCBP1Q15365 356 aaKnown RBP eCLIP24.95■■□□□ 1.58
LINC01116-201ENST00000295549 FAM43BQ6ZT52 329 aaPredicted RBP24.95■■□□□ 1.58
LINC01116-201ENST00000295549 UNC13DQ70J99 1090 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 CCDC65Q8IXS2 484 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 DEPTORQ8TB45 409 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 KCNN1Q92952 543 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 C2orf40Q9H1Z8 148 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 ZHX3Q9H4I2 956 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 AGO3Q9H9G7 860 aaKnown RBP24.95■■□□□ 1.58
LINC01116-201ENST00000295549 KMT5AQ9NQR1 393 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 PANK4Q9NVE7 773 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 PCDH10Q9P2E7 1040 aa24.95■■□□□ 1.58
LINC01116-201ENST00000295549 HOOK1Q9UJC3 728 aaKnown RBP24.95■■□□□ 1.58
LINC01116-201ENST00000295549 CCDC169A6NNP5 214 aa24.94■■□□□ 1.58
LINC01116-201ENST00000295549 TRAK2O60296 914 aa24.94■■□□□ 1.58
LINC01116-201ENST00000295549 SCP2P22307 547 aa24.94■■□□□ 1.58
LINC01116-201ENST00000295549 CASP1P29466 404 aa24.94■■□□□ 1.58
LINC01116-201ENST00000295549 EFNA5P52803 228 aa24.94■■□□□ 1.58
LINC01116-201ENST00000295549 POSTNQ15063 836 aa24.94■■□□□ 1.58
LINC01116-201ENST00000295549 PLEKHG4Q58EX7 1191 aa24.94■■□□□ 1.58
LINC01116-201ENST00000295549 ZBTB8OSQ8IWT0 167 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms