RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 JAKMIP2Q96AA8 810 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 HVCN1Q96D96 273 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 NAPGQ99747 312 aaPredicted RBP10.02□□□□□ -0.81
PDPN-201ENST00000294489 MKNK1Q9BUB5 465 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 CARD6Q9BX69 1037 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 TSGA10Q9BZW7 698 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 GBP3Q9H0R5 595 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 NMRK2Q9NPI5 230 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 EFCAB8A8MWE9 144 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 AKR1B10O60218 316 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 PGK2P07205 417 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 PSMC2P35998 433 aaKnown RBP10.01□□□□□ -0.81
PDPN-201ENST00000294489 ELF2Q15723 593 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 DCAF17Q5H9S7 520 aaPredicted RBP10.01□□□□□ -0.81
PDPN-201ENST00000294489 TCERG1LQ5VWI1 586 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 DPY19L2P1Q6NXN4 242 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 METTL7BQ6UX53 244 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 CYFIP1Q7L576 1253 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 ZNF526Q8TF50 670 aaPredicted RBP10.01□□□□□ -0.81
PDPN-201ENST00000294489 CRACR2AQ9BSW2 395 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 NLRC4Q9NPP4 1024 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 PASKQ96RG2 1323 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 TMEM150BA6NC51 233 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 ASB14A6NK59 587 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 USO1O60763 962 aaKnown RBP10.01□□□□□ -0.81
PDPN-201ENST00000294489 POLR2FP61218 127 aaKnown RBP10.01□□□□□ -0.81
PDPN-201ENST00000294489 PRKCEQ02156 737 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 KIF5AQ12840 1032 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 TARBP2Q15633 366 aaKnown RBP10.01□□□□□ -0.81
PDPN-201ENST00000294489 SLC9C1Q4G0N8 1177 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 GLIPR1L2Q4G1C9 344 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 XKR9Q5GH70 373 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 SFMBT2Q5VUG0 894 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 PLA2G4FQ68DD2 849 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 MAMDC4Q6UXC1 1216 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 SEPT14Q6ZU15 432 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 SYCP3Q8IZU3 236 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 TXLNBQ8N3L3 684 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 KIFAP3Q92845 792 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 KATNBL1Q9H079 304 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 CYP26B1Q9NR63 512 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 ARHGAP20Q9P2F6 1191 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 DIS3Q9Y2L1 958 aaKnown RBP10.01□□□□□ -0.81
PDPN-201ENST00000294489 FRMD4BQ9Y2L6 1034 aa10.01□□□□□ -0.81
PDPN-201ENST00000294489 SSU72P8A0A1W2PR75 194 aa10□□□□□ -0.81
PDPN-201ENST00000294489 K7ENM7 598 aa10□□□□□ -0.81
PDPN-201ENST00000294489 DGAT1O75907 488 aa10□□□□□ -0.81
PDPN-201ENST00000294489 ARIH2O95376 493 aa10□□□□□ -0.81
PDPN-201ENST00000294489 SCP2P22307 547 aa10□□□□□ -0.81
PDPN-201ENST00000294489 KIF11P52732 1056 aa10□□□□□ -0.81
PDPN-201ENST00000294489 VAV2P52735 878 aa10□□□□□ -0.81
PDPN-201ENST00000294489 NPEPPSP55786 919 aa10□□□□□ -0.81
PDPN-201ENST00000294489 EXOC3L4Q17RC7 722 aa10□□□□□ -0.81
PDPN-201ENST00000294489 ERCC6LQ2NKX8 1250 aa10□□□□□ -0.81
PDPN-201ENST00000294489 CELF3Q5SZQ8 465 aaKnown RBP10□□□□□ -0.81
PDPN-201ENST00000294489 MAEAQ7L5Y9 396 aa10□□□□□ -0.81
PDPN-201ENST00000294489 RASAL3Q86YV0 1011 aa10□□□□□ -0.81
PDPN-201ENST00000294489 FAM186BQ8IYM0 893 aa10□□□□□ -0.81
PDPN-201ENST00000294489 PARK7Q99497 189 aaKnown RBP10□□□□□ -0.81
PDPN-201ENST00000294489 TMEM206Q9H813 350 aa10□□□□□ -0.81
PDPN-201ENST00000294489 EFCC1Q9HA90 598 aa10□□□□□ -0.81
PDPN-201ENST00000294489 XPNPEP1Q9NQW7 623 aa10□□□□□ -0.81
PDPN-201ENST00000294489 ZNF302Q9NR11 478 aa10□□□□□ -0.81
PDPN-201ENST00000294489 MAPK13O15264 365 aa10□□□□□ -0.81
PDPN-201ENST00000294489 NOL4O94818 638 aa10□□□□□ -0.81
PDPN-201ENST00000294489 ABL1P00519 1130 aa10□□□□□ -0.81
PDPN-201ENST00000294489 EIF4A3P38919 411 aaKnown RBP10□□□□□ -0.81
PDPN-201ENST00000294489 GRB14Q14449 540 aa10□□□□□ -0.81
PDPN-201ENST00000294489 FAM110CQ1W6H9 321 aa10□□□□□ -0.81
PDPN-201ENST00000294489 TDRD12Q587J7 1177 aaKnown RBP10□□□□□ -0.81
PDPN-201ENST00000294489 UTP14CQ5TAP6 766 aaKnown RBP10□□□□□ -0.81
PDPN-201ENST00000294489 IFIH1Q9BYX4 1025 aaKnown RBP10□□□□□ -0.81
PDPN-201ENST00000294489 DHX33Q9H6R0 707 aaKnown RBP10□□□□□ -0.81
PDPN-201ENST00000294489 AGPAT3Q9NRZ7 376 aa10□□□□□ -0.81
PDPN-201ENST00000294489 CDC23Q9UJX2 597 aa10□□□□□ -0.81
PDPN-201ENST00000294489 MGAMO43451 1857 aa10□□□□□ -0.81
PDPN-201ENST00000294489 OATP04181 439 aa10□□□□□ -0.81
PDPN-201ENST00000294489 SERPING1P05155 500 aa10□□□□□ -0.81
PDPN-201ENST00000294489 PLEKP08567 350 aaPredicted RBP10□□□□□ -0.81
PDPN-201ENST00000294489 CASP4P49662 377 aa10□□□□□ -0.81
PDPN-201ENST00000294489 CYP27A1Q02318 531 aa10□□□□□ -0.81
PDPN-201ENST00000294489 GBP6Q6ZN66 633 aa10□□□□□ -0.81
PDPN-201ENST00000294489 MCPH1Q8NEM0 835 aa10□□□□□ -0.81
PDPN-201ENST00000294489 EMID1Q96A84 441 aaPredicted RBP10□□□□□ -0.81
PDPN-201ENST00000294489 PLCB1Q9NQ66 1216 aa10□□□□□ -0.81
PDPN-201ENST00000294489 EMSYQ7Z589 1322 aa10□□□□□ -0.81
PDPN-201ENST00000294489 TADA3O75528 432 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
PDPN-201ENST00000294489 TAPT1Q6NXT6 567 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 PLPPR4Q7Z2D5 763 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 ANKRD13CQ8N6S4 541 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 CEP112Q8N8E3 955 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 TMEM161BQ8NDZ6 487 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 SLC35C1Q96A29 364 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 ACCSQ96QU6 501 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 GPR20Q99678 358 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 LUC7LQ9NQ29 371 aaKnown RBP9.99□□□□□ -0.81
PDPN-201ENST00000294489 TRIM10Q9UDY6 481 aa9.99□□□□□ -0.81
PDPN-201ENST00000294489 GTPBP10A4D1E9 387 aaKnown RBP9.99□□□□□ -0.81
PDPN-201ENST00000294489 LCA5LO95447 670 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms