RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 UTP11Q9Y3A2 253 aaKnown RBP18.28■□□□□ 0.52
CHRNE-201ENST00000293780 ATP8B3O60423 1300 aa18.28■□□□□ 0.52
CHRNE-201ENST00000293780 BACH1O14867 736 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 PPP1R12BO60237 982 aaPredicted RBP18.27■□□□□ 0.52
CHRNE-201ENST00000293780 LRRN2O75325 713 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 KIAA0754O94854 1291 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 TMEM253P0C7T8 217 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 NPR1P16066 1061 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 ECE1P42892 770 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 ODF2Q5BJF6 829 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 PHLDB3Q6NSJ2 640 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 AADACL2Q6P093 401 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 ATP8B4Q8TF62 1192 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 CTNNBL1Q8WYA6 563 aaPredicted RBP18.27■□□□□ 0.52
CHRNE-201ENST00000293780 SEC14L1Q92503 715 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 TDRD3Q9H7E2 651 aaKnown RBP18.27■□□□□ 0.52
CHRNE-201ENST00000293780 TUFT1Q9NNX1 390 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 SLC12A6Q9UHW9 1150 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 COG5Q9UP83 839 aa18.27■□□□□ 0.52
CHRNE-201ENST00000293780 FAM107AO95990 144 aa18.27■□□□□ 0.51
CHRNE-201ENST00000293780 SLC15A2Q16348 729 aa18.27■□□□□ 0.51
CHRNE-201ENST00000293780 FAM178BQ8IXR5 827 aa18.27■□□□□ 0.51
CHRNE-201ENST00000293780 NCANO14594 1321 aa18.27■□□□□ 0.51
CHRNE-201ENST00000293780 FOXN3O00409 490 aaPredicted RBP18.26■□□□□ 0.51
CHRNE-201ENST00000293780 TNFAIP3P21580 790 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 FNTAP49354 379 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 IFT88Q13099 833 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 RNF187Q5TA31 235 aaPredicted RBP18.26■□□□□ 0.51
CHRNE-201ENST00000293780 CCDC174Q6PII3 467 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 BTNL9Q6UXG8 535 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 PODNQ7Z5L7 613 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 GLG1Q92896 1179 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 DMAC2Q9NW81 257 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 TMOD4Q9NZQ9 345 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 FRMD4BQ9Y2L6 1034 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 ATP8A1Q9Y2Q0 1164 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 NRXN2Q9P2S2 1712 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 PIK3CDO00329 1044 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 MAGOHP61326 146 aaKnown RBP18.26■□□□□ 0.51
CHRNE-201ENST00000293780 SLC27A3Q5K4L6 730 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 DACT2Q5SW24 774 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 ODR4Q5SWX8 454 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 RBM26Q5T8P6 1007 aaKnown RBP18.26■□□□□ 0.51
CHRNE-201ENST00000293780 MMS22LQ6ZRQ5 1243 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 ARFGAP2Q8N6H7 521 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 ALG3Q92685 438 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 MAGOHBQ96A72 148 aaKnown RBP18.26■□□□□ 0.51
CHRNE-201ENST00000293780 HOOK2Q96ED9 719 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 PAGR1Q9BTK6 254 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
CHRNE-201ENST00000293780 APEX2Q9UBZ4 518 aa18.26■□□□□ 0.51
CHRNE-201ENST00000293780 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 HNRNPH1P31943 449 aaKnown RBP18.25■□□□□ 0.51
CHRNE-201ENST00000293780 NFIL3Q16649 462 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 KCNV1Q6PIU1 500 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 RUFY4Q6ZNE9 571 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 MAEAQ7L5Y9 396 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 HS2ST1Q7LGA3 356 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 SLC20A1Q8WUM9 679 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 CYFIP2Q96F07 1278 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 MKNK1Q9BUB5 465 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 FAM114A2Q9NRY5 505 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 CHORDC1Q9UHD1 332 aaPredicted RBP18.25■□□□□ 0.51
CHRNE-201ENST00000293780 TTC7AQ9ULT0 858 aaPredicted RBP18.25■□□□□ 0.51
CHRNE-201ENST00000293780 ATXN2Q99700 1313 aaKnown RBP18.25■□□□□ 0.51
CHRNE-201ENST00000293780 TISP43B9A030 160 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 ARP10275 920 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 PRELPP51888 382 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 DLG4P78352 724 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 PPP2R5CQ13362 524 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 BIRC3Q13489 604 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 MTMR3Q13615 1198 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 QPCTQ16769 361 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 KRT71Q3SY84 523 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
CHRNE-201ENST00000293780 SLC5A5Q92911 643 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 UNC45AQ9H3U1 944 aa18.25■□□□□ 0.51
CHRNE-201ENST00000293780 GMNCA6NCL1 334 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 GAS7O60861 476 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 ALDH1B1P30837 517 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 PPP2R2AP63151 447 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 MYL7Q01449 175 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 SPATS2Q86XZ4 545 aaKnown RBP18.24■□□□□ 0.51
CHRNE-201ENST00000293780 ACER1Q8TDN7 264 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 ZNF622Q969S3 477 aaKnown RBP eCLIP18.24■□□□□ 0.51
CHRNE-201ENST00000293780 PCIF1Q9H4Z3 704 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 GEMIN8Q9NWZ8 242 aaKnown RBP18.24■□□□□ 0.51
CHRNE-201ENST00000293780 SCN9AQ15858 1988 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 EXOC3O60645 756 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 ZNF131P52739 623 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 PTENP60484 403 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 AGBL2Q5U5Z8 902 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 LMO3Q8TAP4 145 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 FMO2Q99518 471 aa18.24■□□□□ 0.51
CHRNE-201ENST00000293780 STAT2P52630 851 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 DR1Q01658 176 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 STRIP1Q5VSL9 837 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 MICALCLQ6ZW33 695 aa18.23■□□□□ 0.51
CHRNE-201ENST00000293780 SUGP1Q8IWZ8 645 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms