RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 SLC16A4O15374 487 aa13.69□□□□□ -0.22
PTCD1-201ENST00000292478 FOXP2O15409 715 aa13.69□□□□□ -0.22
PTCD1-201ENST00000292478 DCTN3O75935 186 aa13.69□□□□□ -0.22
PTCD1-201ENST00000292478 SLCO1A2P46721 670 aa13.69□□□□□ -0.22
PTCD1-201ENST00000292478 KLHL38Q2WGJ6 581 aa13.69□□□□□ -0.22
PTCD1-201ENST00000292478 METTL16Q86W50 562 aaKnown RBP13.69□□□□□ -0.22
PTCD1-201ENST00000292478 SCYL3Q8IZE3 742 aa13.69□□□□□ -0.22
PTCD1-201ENST00000292478 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTCD1-201ENST00000292478 DRAP1Q14919 205 aaPredicted RBP13.69□□□□□ -0.22
PTCD1-201ENST00000292478 OR6B3Q8NGW1 331 aa13.69□□□□□ -0.22
PTCD1-201ENST00000292478 WDR46O15213 610 aaKnown RBP13.68□□□□□ -0.22
PTCD1-201ENST00000292478 CA4P22748 312 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 ZNF564Q8TBZ8 553 aaPredicted RBP13.68□□□□□ -0.22
PTCD1-201ENST00000292478 LXNQ9BS40 222 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 CPVLQ9H3G5 476 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 SMYD2Q9NRG4 433 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 A0A1B0GTH6 734 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 TDP2O95551 362 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 POTEIP0CG38 1075 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
PTCD1-201ENST00000292478 TRIM68Q6AZZ1 485 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 KCNV1Q6PIU1 500 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 POTEGQ6S5H5 508 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 POTEEQ6S8J3 1075 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 THNSL1Q8IYQ7 743 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 BEST2Q8NFU1 509 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 FAF2Q96CS3 445 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 ACAD9Q9H845 621 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 KCND2Q9NZV8 630 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 MRFAP1Q9Y605 127 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 TEX33O43247 280 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 ATP5HO75947 161 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 KRT7P08729 469 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 PAMP19021 973 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 RCN2Q14257 317 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 CFAP36Q96G28 342 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 MRPL4Q9BYD3 311 aaKnown RBP13.68□□□□□ -0.22
PTCD1-201ENST00000292478 ZWILCHQ9H900 591 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 TBK1Q9UHD2 729 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.68□□□□□ -0.22
PTCD1-201ENST00000292478 ZHX2Q9Y6X8 837 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 AKR1B1P15121 316 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 SOX5P35711 763 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 NFIXQ14938 502 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 KLC3Q6P597 504 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 GPD1LQ8N335 351 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 RFFLQ8WZ73 363 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 SERPINI1Q99574 410 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 FAM213AQ9BRX8 229 aa13.68□□□□□ -0.22
PTCD1-201ENST00000292478 INO80Q9ULG1 1556 aaPredicted RBP13.68□□□□□ -0.22
PTCD1-201ENST00000292478 ZC3H13Q5T200 1668 aaKnown RBP13.68□□□□□ -0.22
PTCD1-201ENST00000292478 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 XPAP23025 273 aaPredicted RBP13.67□□□□□ -0.22
PTCD1-201ENST00000292478 TTLL4Q14679 1199 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 ZNF449Q6P9G9 518 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 THEM5Q8N1Q8 247 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 SAYSD1Q9NPB0 183 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 UBE4BO95155 1302 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 AFF2P51816 1311 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 KRT38O76015 456 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 IQCB1Q15051 598 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 ZNF568Q3ZCX4 644 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
PTCD1-201ENST00000292478 HSPH1Q92598 858 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 MTMR4Q9NYA4 1195 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 NYAP2Q9P242 653 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 SNX24Q9Y343 169 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 ESYT2A0FGR8 921 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 MARK3P27448 753 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 DHX34Q14147 1143 aaKnown RBP13.67□□□□□ -0.22
PTCD1-201ENST00000292478 PDCD7Q8N8D1 485 aaKnown RBP13.67□□□□□ -0.22
PTCD1-201ENST00000292478 WRNIP1Q96S55 665 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 NUP85Q9BW27 656 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 GINM1Q9NU53 330 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 TOM1L1O75674 476 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 RHOBTB3O94955 611 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 DPYDQ12882 1025 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 TMEM270Q6UE05 265 aa13.67□□□□□ -0.22
PTCD1-201ENST00000292478 GCOM2Q9BZD3 368 aaPredicted RBP13.67□□□□□ -0.22
PTCD1-201ENST00000292478 SESN3P58005 492 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ZNF543Q08ER8 600 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ADSSL1Q8N142 457 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 STAG2Q8N3U4 1231 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 VPS39Q96JC1 886 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 GABBR1Q9UBS5 961 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ANGPTL2Q9UKU9 493 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 ATP6V1E2Q96A05 226 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 TAF1DQ9H5J8 278 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 POLR1AO95602 1720 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 CLTCQ00610 1675 aaKnown RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 CTIFO43310 598 aaKnown RBP13.66□□□□□ -0.22
PTCD1-201ENST00000292478 EFNA5P52803 228 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 PMS2P54278 862 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 CEP55Q53EZ4 464 aa13.66□□□□□ -0.22
PTCD1-201ENST00000292478 TAF1BQ53T94 588 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms