RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CYP4F11Q9HBI6 524 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 WDR70Q9NW82 654 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 ABCA6Q8N139 1617 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 LMNAP02545 664 aaKnown RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 GPS1Q13098 491 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 HEY1Q9Y5J3 304 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 CFAP69A5D8W1 941 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 ARL4AP40617 200 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 LONRF1Q17RB8 773 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 USP49Q70CQ1 688 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 ARL8AQ96BM9 186 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 ARHGEF40Q8TER5 1519 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 WDR64B1ANS9 1081 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 MEFVO15553 781 aaPredicted RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 EEF1DP29692 281 aaKnown RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 ANKMY2Q8IV38 441 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 EHD2Q9NZN4 543 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 PPME1Q9Y570 386 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 TARBP1Q13395 1621 aaKnown RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 WDR19Q8NEZ3 1342 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 ARL4CP56559 192 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 KRT17Q04695 432 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 TFDP1Q14186 410 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 ATP6V1E2Q96A05 226 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 GOLGA8RI6L899 631 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 KIF1CO43896 1103 aaKnown RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 CTDNEP1O95476 244 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 PDIA2Q13087 525 aaKnown RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 CCT8L2Q96SF2 557 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 SNX25Q9H3E2 840 aa16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 IPO11Q9UI26 975 aaKnown RBP16.39■□□□□ 0.21
SHROOM4-201ENST00000289292 ARAP3Q8WWN8 1544 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 CPDO75976 1380 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 TSPOAP1O95153 1857 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 CYP27B1O15528 508 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 LPXNO60711 386 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 TMEM270Q6UE05 265 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 ARMC2Q8NEN0 867 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 FAM213AQ9BRX8 229 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 NUDCD1Q96RS6 583 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 IRAK4Q9NWZ3 460 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 AP5Z1O43299 807 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 DNAJC6O75061 913 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 GRM4Q14833 912 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 DGKHQ86XP1 1220 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 PNKPQ96T60 521 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 ABCF3Q9NUQ8 709 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 ZCCHC11Q5TAX3 1644 aaKnown RBP16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 GRIN1Q05586 938 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 SPOUT1Q5T280 376 aaKnown RBP16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 CCNI2Q6ZMN8 369 aaPredicted RBP16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 PPP1R36Q96LQ0 422 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 FGD4Q96M96 766 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 BARHL2Q9NY43 387 aa16.38■□□□□ 0.21
SHROOM4-201ENST00000289292 PPP1R37O75864 691 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 SRGAP2BP0DMP2 458 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 KIF19Q2TAC6 998 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 AGR3Q8TD06 166 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 SNF8Q96H20 258 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 PCSK1NQ9UHG2 260 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 PNMA2Q9UL42 364 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 ATG9AQ7Z3C6 839 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 AXIN2Q9Y2T1 843 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 ANGPTL3Q9Y5C1 460 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 CSADQ9Y600 493 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 SCINQ9Y6U3 715 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 A0A1W2PQC6 194 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 ZRANB2O95218 330 aaKnown RBP eCLIP16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 SERPINB2P05120 415 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 TMTC4Q5T4D3 741 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 NYAP1Q6ZVC0 841 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 SERPINI1Q99574 410 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 NGRNQ9NPE2 291 aaKnown RBP16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 ZBTB5O15062 677 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 S100BP04271 92 aaPredicted RBP16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 GYPCP04921 128 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 SEC24CP53992 1094 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 TRIM59Q8IWR1 403 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 ZIM3Q96PE6 472 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 CROCC2H7BZ55 1655 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 MIF4GDA9UHW6 222 aaKnown RBP16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 PLA2G4AP47712 749 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 ZBTB41Q5SVQ8 909 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 PPM1NQ8N819 430 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 DTX3LQ8TDB6 740 aa16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 RNPC3Q96LT9 517 aaKnown RBP16.37■□□□□ 0.21
SHROOM4-201ENST00000289292 ZNF233A6NK53 670 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 INPP1P49441 399 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 VAMP7P51809 220 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 EAPPQ56P03 285 aaPredicted RBP16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 TRIM67Q6ZTA4 783 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 ERVV-1B6SEH8 477 aa16.36■□□□□ 0.21
SHROOM4-201ENST00000289292 TSGA10IPQ3SY00 556 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms