RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 HOXA13P31271 388 aaPredicted RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 GHRHRQ02643 423 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 ZCWPW2Q504Y3 356 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 FBXO38Q6PIJ6 1188 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 NIPA1Q7RTP0 329 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 SLC5A5Q92911 643 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 KCNN1Q92952 543 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 NACC2Q96BF6 587 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 HAUS4Q9H6D7 363 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 HOMER3Q9NSC5 361 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 FBXO28Q9NVF7 368 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 PCDHA2Q9Y5H9 948 aa8.25□□□□□ -1.09
TRIM42-201ENST00000286349 EPN1Q9Y6I3 576 aaPredicted RBP8.25□□□□□ -1.09
TRIM42-201ENST00000286349 EFCAB8A8MWE9 144 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 BTBD19C9JJ37 291 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 NDUFA10O95299 355 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 MSL3P1P0C860 447 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 SPATA31C1P0DKV0 1188 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 BCRP11274 1271 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 HNRNPH3P31942 346 aaKnown RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 VEGFBP49765 207 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 ERVK-24P63145 666 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 NSUN2Q08J23 767 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 SNAPC2Q13487 334 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 CEP55Q53EZ4 464 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 CCDC92Q53HC0 331 aaPredicted RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 CCDC174Q6PII3 467 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 LRRC55Q6ZSA7 311 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 LMNTD2Q8IXW0 634 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 ZC3H3Q8IXZ2 948 aaKnown RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 C3orf20Q8ND61 904 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 SCLT1Q96NL6 688 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 ATAD5Q96QE3 1844 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 P2RX7Q99572 595 aaKnown RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 EIF2AK1Q9BQI3 630 aaKnown RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 SLF1Q9BQI6 1058 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 DESI2Q9BSY9 194 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 QPCTLQ9NXS2 382 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 DIS3Q9Y2L1 958 aaKnown RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 POTEFA5A3E0 1075 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 CALUO43852 315 aaPredicted RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 TBCAO75347 108 aaKnown RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 PSMD10O75832 226 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 RTN3O95197 1032 aaPredicted RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 STAT3P40763 770 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 HSD17B4P51659 736 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 CORO7P57737 925 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 MTF1Q14872 753 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 KBTBD12Q3ZCT8 623 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 CCDC40Q4G0X9 1142 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 POTEGQ6S5H5 508 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 GADL1Q6ZQY3 521 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 STXBP4Q6ZWJ1 553 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 OTOP1Q7RTM1 612 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 CAPNS2Q96L46 248 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 RIT2Q99578 217 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 TSGA10Q9BZW7 698 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 RPAP3Q9H6T3 665 aaPredicted RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 MRPL44Q9H9J2 332 aaKnown RBP8.24□□□□□ -1.09
TRIM42-201ENST00000286349 PSD3Q9NYI0 1048 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 SEL1LQ9UBV2 794 aa8.24□□□□□ -1.09
TRIM42-201ENST00000286349 UBE4BO95155 1302 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CCL15-CCL14A0A0B4J2E2 113 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CTAGE9A4FU28 777 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 IGF2BP3O00425 579 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CETN3O15182 167 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 PEX10O60683 326 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 GAS7O60861 476 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 HSPA6P17066 643 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 RPL13P26373 211 aaKnown RBP8.23□□□□□ -1.09
TRIM42-201ENST00000286349 GTF2A2P52657 109 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 GRM1Q13255 1194 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 GIT2Q14161 759 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CCL15Q16663 113 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 BMT2Q1RMZ1 405 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CATSPERGQ6ZRH7 1159 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 TMEM110Q86TL2 294 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 UBXN4Q92575 508 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 EZH1Q92800 747 aaPredicted RBP8.23□□□□□ -1.09
TRIM42-201ENST00000286349 HPS3Q969F9 1004 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 GJA10Q969M2 543 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 HSD17B14Q9BPX1 270 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 TEKT3Q9BXF9 490 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 OLFML3Q9NRN5 406 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 ARGLU1Q9NWB6 273 aaPredicted RBP8.23□□□□□ -1.09
TRIM42-201ENST00000286349 MKS1Q9NXB0 559 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 MCM8Q9UJA3 840 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CCPG1Q9ULG6 757 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 TRAF3IP3Q9Y228 551 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 MRFAP1Q9Y605 127 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CENPFP49454 3210 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 EIF3CLB5ME19 914 aaKnown RBP8.23□□□□□ -1.09
TRIM42-201ENST00000286349 MEIS1O00470 390 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 PDXKO00764 312 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 EIF3DO15371 548 aaKnown RBP eCLIP8.23□□□□□ -1.09
TRIM42-201ENST00000286349 KRT86O43790 486 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 CETPP11597 493 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 EIF2B5Q13144 721 aaKnown RBP8.23□□□□□ -1.09
TRIM42-201ENST00000286349 EPHA7Q15375 998 aa8.23□□□□□ -1.09
TRIM42-201ENST00000286349 ELF2Q15723 593 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms