RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GOLPH3Q9H4A6 298 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 RRAGCQ9HB90 399 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 EHD2Q9NZN4 543 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 PARP14Q460N5 1801 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 PPP1R37O75864 691 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 NPTX2P47972 431 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 MYL7Q01449 175 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 ASTE1Q2TB18 679 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 SIX2Q9NPC8 291 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 KMT5AQ9NQR1 393 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 PRDM10Q9NQV6 1147 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 PACSIN2Q9UNF0 486 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 H2AFXP16104 143 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 BFSP1Q12934 665 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 DMP1Q13316 513 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 STXBP2Q15833 593 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 ZNF746Q6NUN9 644 aaPredicted RBP19.57■□□□□ 0.72
CAPN1-201ENST00000279247 NFRKBQ6P4R8 1299 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 TSGA10Q9BZW7 698 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 HSPBP1Q9NZL4 362 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 EMSYQ7Z589 1322 aa19.57■□□□□ 0.72
CAPN1-201ENST00000279247 ANKRD63C9JTQ0 380 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 POTEB2H3BUK9 544 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 PSAPP07602 524 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 KLRC1P26715 233 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 USP8P40818 1118 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 TMCO3Q6UWJ1 677 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 TRAPPC11Q7Z392 1133 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 ATP6V0A1Q93050 837 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 NUCKS1Q9H1E3 243 aaKnown RBP19.56■□□□□ 0.72
CAPN1-201ENST00000279247 ARGLU1Q9NWB6 273 aaPredicted RBP19.56■□□□□ 0.72
CAPN1-201ENST00000279247 SSU72P8A0A1W2PR75 194 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 FTCDO95954 541 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 LBX2Q6XYB7 198 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 TMEM143Q96AN5 459 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 BICD1Q96G01 975 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 POP1Q99575 1024 aaKnown RBP19.56■□□□□ 0.72
CAPN1-201ENST00000279247 SPATC1LQ9H0A9 340 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 DNAJC12Q9UKB3 198 aa19.56■□□□□ 0.72
CAPN1-201ENST00000279247 SMTNP53814 917 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 RNASE9P60153 205 aaKnown RBP19.55■□□□□ 0.72
CAPN1-201ENST00000279247 OTUD6AQ7L8S5 288 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 IRF2BP2Q7Z5L9 587 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 CBWD2Q8IUF1 395 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 ASCC2Q9H1I8 757 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-201ENST00000279247 SLC18A3Q16572 532 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 DPY19L2P1Q6NXN4 242 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 COG1Q8WTW3 980 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 L3MBTL3Q96JM7 780 aaPredicted RBP19.55■□□□□ 0.72
CAPN1-201ENST00000279247 TMEM206Q9H813 350 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 DMAC2Q9NW81 257 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 BRCA2P51587 3418 aa19.55■□□□□ 0.72
CAPN1-201ENST00000279247 GRIN3BO60391 1043 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 ZMYND10O75800 440 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 CLSTN1O94985 981 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 NF2P35240 595 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 NOP2P46087 812 aaKnown RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 PPP3CAQ08209 521 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 SAMD3Q8N6K7 520 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 GPR161Q8N6U8 529 aaKnown RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 RABGGTAQ92696 567 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 ALS2CR12Q96Q35 445 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 PNKPQ96T60 521 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 INTS2Q9H0H0 1204 aaKnown RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 TXNRD2Q9NNW7 524 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 AIPL1Q9NZN9 384 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 MARK3P27448 753 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 MAPK8IP2Q13387 824 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 DRAP1Q14919 205 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 WHAMMP3Q1A5X7 153 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 USP50Q70EL3 339 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 XXYLT1Q8NBI6 393 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 TRIM58Q8NG06 486 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 PLCB1Q9NQ66 1216 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 ADGRA3Q8IWK6 1321 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 PDE2AO00408 941 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 LYPLA2O95372 231 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 ALDH5A1P51649 535 aaPredicted RBP19.54■□□□□ 0.72
CAPN1-201ENST00000279247 GOLGA5Q8TBA6 731 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 STRA6Q9BX79 667 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 PLEKHA4Q9H4M7 779 aa19.54■□□□□ 0.72
CAPN1-201ENST00000279247 VAMP7P51809 220 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 POLGP54098 1239 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-201ENST00000279247 Q3C1V9 767 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 SH3D19Q5HYK7 790 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 U2AF1L4Q8WU68 220 aaKnown RBP19.53■□□□□ 0.72
CAPN1-201ENST00000279247 OPTNQ96CV9 577 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 TOPORSQ9NS56 1045 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-201ENST00000279247 ANKEF1Q9NU02 776 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 TBX20Q9UMR3 447 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 MYH9P35579 1960 aaKnown RBP19.53■□□□□ 0.72
CAPN1-201ENST00000279247 HNRNPDLO14979 420 aaKnown RBP19.53■□□□□ 0.72
CAPN1-201ENST00000279247 ATP2A1O14983 1001 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 EVI5O60447 810 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 ADRB2P07550 413 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 DLATP10515 647 aaKnown RBP19.53■□□□□ 0.72
CAPN1-201ENST00000279247 MAP2K1Q02750 393 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-201ENST00000279247 C2orf54Q08AI8 447 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 LY6KQ17RY6 165 aa19.53■□□□□ 0.72
CAPN1-201ENST00000279247 XRRA1Q6P2D8 792 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms