RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 PGM2Q96G03 612 aa20.19■□□□□ 0.82
SSC4D-201ENST00000275560 THRAP3Q9Y2W1 955 aaKnown RBP20.19■□□□□ 0.82
SSC4D-201ENST00000275560 PNMA6FA0A0J9YX94 578 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 CCDC169A6NNP5 214 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 RTN2O75298 545 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 TM4SF1P30408 202 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 GSTO1P78417 241 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 PPP4R3CPQ6ZMV5 832 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 CDK5RAP2Q96SN8 1893 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 AFF2P51816 1311 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 SRCAPQ6ZRS2 3230 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 IGF2BP3O00425 579 aaKnown RBP eCLIP20.18■□□□□ 0.82
SSC4D-201ENST00000275560 RARAP10276 462 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 SMARCA1P28370 1054 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 KCNJ1P48048 391 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 SNAP25P60880 206 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 NCALDP61601 193 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 DDB1Q16531 1140 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 LONRF1Q17RB8 773 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 BARGINQ6ZT62 677 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 POP1Q99575 1024 aaKnown RBP20.18■□□□□ 0.82
SSC4D-201ENST00000275560 RUSC1Q9BVN2 902 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 ECT2Q9H8V3 914 aa20.18■□□□□ 0.82
SSC4D-201ENST00000275560 TULP1O00294 542 aaPredicted RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 TRIM49P0CI25 452 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 TRIM49CP0CI26 452 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 ADCY1Q08828 1119 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 ITIH4Q14624 930 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 SLC10A5Q5PT55 438 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 NAIF1Q69YI7 327 aaPredicted RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 DNAJC12Q9UKB3 198 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 GOLGA6L10A0A0M3HER8 536 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 TCP11X1B4DZS4 312 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 DIAPH2O60879 1101 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 PTGIRP43119 386 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 ZKSCAN8Q15776 578 aaPredicted RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 CNGA2Q16280 664 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 ZC2HC1CQ53FD0 456 aaPredicted RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 PRR16Q569H4 304 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 PRELID2Q8N945 189 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 RSRC1Q96IZ7 334 aaKnown RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 P2RX7Q99572 595 aaKnown RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 DDX23Q9BUQ8 820 aaKnown RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 EBF2Q9HAK2 575 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 DNAJC17Q9NVM6 304 aaKnown RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 VCAM1P19320 739 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 SOX5P35711 763 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 AUHQ13825 339 aaKnown RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 MAEAQ7L5Y9 396 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 EPM2AIP1Q7L775 607 aaPredicted RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 DYDC1Q8WWB3 177 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 ZNF570Q96NI8 536 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 SETDB2Q96T68 719 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 TRIM6Q9C030 488 aaPredicted RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 USP40Q9NVE5 1235 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 CTNNAL1Q9UBT7 734 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 TTC7AQ9ULT0 858 aaPredicted RBP20.17■□□□□ 0.82
SSC4D-201ENST00000275560 C15orf41Q9Y2V0 281 aa20.17■□□□□ 0.82
SSC4D-201ENST00000275560 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 UBAP1LF5GYI3 381 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 CALUO43852 315 aaPredicted RBP20.16■□□□□ 0.82
SSC4D-201ENST00000275560 KRT16P08779 473 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 NQO1P15559 274 aaKnown RBP20.16■□□□□ 0.82
SSC4D-201ENST00000275560 FERP16591 822 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 NPEPPSP55786 919 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 RHBDL3P58872 404 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 CBWD6Q4V339 395 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 ASPRV1Q53RT3 343 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 CBWD3Q5JTY5 395 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 CBWD5Q5RIA9 395 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 ANKRD42Q8N9B4 389 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 GDAP1Q8TB36 358 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 SLC20A1Q8WUM9 679 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 BHMT2Q9H2M3 363 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 ALG6Q9Y672 507 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 SNX3O60493 162 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 ZNF543Q08ER8 600 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 ZNF746Q6NUN9 644 aaPredicted RBP20.16■□□□□ 0.82
SSC4D-201ENST00000275560 EXOC3L1Q86VI1 746 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 GPR88Q9GZN0 384 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 CARD9Q9H257 536 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 KCNMB3Q9NPA1 279 aa20.16■□□□□ 0.82
SSC4D-201ENST00000275560 RASGRF2O14827 1237 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 UPP2O95045 317 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 TMEM253P0C7T8 217 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 SPATA31C1P0DKV0 1188 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 NMT1P30419 496 aaKnown RBP20.15■□□□□ 0.82
SSC4D-201ENST00000275560 PDXKO00764 312 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 TGFB1I1O43294 461 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 ATMINO43313 823 aaPredicted RBP20.15■□□□□ 0.82
SSC4D-201ENST00000275560 RIPK2O43353 540 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 ACSL3O95573 720 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 GH1P01241 217 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 LDHCP07864 332 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 GSTA1P08263 222 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 ERICH1Q86X53 443 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 RDH13Q8NBN7 331 aa20.15■□□□□ 0.82
SSC4D-201ENST00000275560 L3MBTL3Q96JM7 780 aaPredicted RBP20.15■□□□□ 0.82
SSC4D-201ENST00000275560 NCANO14594 1321 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms