RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 Q9H521 79 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 MCM8Q9UJA3 840 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 COL15A1P39059 1388 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 RFX7Q2KHR2 1363 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 CFAP69A5D8W1 941 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L15C9J2P7 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L13C9JLJ4 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L11C9JVI0 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L18D6R9N7 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L22D6RA61 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L17D6RBQ6 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L19D6RCP7 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L20D6RJB6 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 BBOX1O75936 387 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L24Q0WX57 530 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L6PQ6QN14 398 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 IFT122Q9HBG6 1241 aa12.95□□□□□ -0.34
ERBB2-201ENST00000269571 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
ERBB2-201ENST00000269571 GLI1P08151 1106 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 TRIM49P0CI25 452 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 TRIM49CP0CI26 452 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 HSPA6P17066 643 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 BASP1P80723 227 aaKnown RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 CCDC137Q6PK04 289 aaKnown RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 RNF34Q969K3 372 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 NT5C1BQ96P26 610 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 PPARGC1AQ9UBK2 798 aaKnown RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 MINPP1Q9UNW1 487 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 SPATA31D1Q6ZQQ2 1576 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 GRID2IPA4D2P6 1211 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 CCT8L1PA6NM43 557 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 PODXLO00592 558 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 TTLL1O95922 423 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 LIG4P49917 911 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 TRPM8Q7Z2W7 1104 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 APLFQ8IW19 511 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 POMGNT1Q8WZA1 660 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 CNKSR1Q969H4 720 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 OLFM3Q96PB7 478 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 CSRNP1Q96S65 589 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 PHF20Q9BVI0 1012 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 INTS13Q9NVM9 706 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 TMEM131LA2VDJ0 1609 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 PABPN1LA6NDY0 278 aaKnown RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 HOXA13P31271 388 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 SCTRP47872 440 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 KCNJ1P48048 391 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 PTK2Q05397 1052 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 BYSLQ13895 437 aaKnown RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 SPARCL1Q14515 664 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 DRAP1Q14919 205 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 SLC18A3Q16572 532 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 SYT2Q8N9I0 419 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 BBOF1Q8ND07 529 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 IWS1Q96ST2 819 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 KIAA1210Q9ULL0 1709 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 NPHP3-ACAD11A0A0J9YXS1 232 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 POTEIP0CG38 1075 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 CDC25CP30307 473 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 STAT3P40763 770 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 GCLMP48507 274 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 ALX1Q15699 326 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 ARHGEF16Q5VV41 709 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 POTEGQ6S5H5 508 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 POTEEQ6S8J3 1075 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 PAGR1Q9BTK6 254 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 SMYD3Q9H7B4 428 aa12.94□□□□□ -0.34
ERBB2-201ENST00000269571 MRPL11Q9Y3B7 192 aaKnown RBP12.94□□□□□ -0.34
ERBB2-201ENST00000269571 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 USP17L5A8MUK1 530 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 IGF2BP3O00425 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
ERBB2-201ENST00000269571 MTM1Q13496 603 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 ASPRV1Q53RT3 343 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 OLFML2BQ68BL8 750 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 SPATA21Q7Z572 469 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 TRIM42Q8IWZ5 723 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 PPP4R1Q8TF05 950 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 RAPGEF5Q92565 580 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 GINM1Q9NU53 330 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 ZFP69BQ9UJL9 534 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 H7C0C1 242 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 FTLP02792 175 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-201ENST00000269571 NR3C1P04150 777 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 ATP5OP48047 213 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 PPM1FP49593 454 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-201ENST00000269571 MXI1P50539 228 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 GRAPQ13588 217 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 PDIA6Q15084 440 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 ZNF772Q68DY9 489 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-201ENST00000269571 TRIM74Q86UV6 250 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 TRIM73Q86UV7 250 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 DGKHQ86XP1 1220 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 FUKQ8N0W3 1084 aa12.93□□□□□ -0.34
ERBB2-201ENST00000269571 GRAPLQ8TC17 118 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-201ENST00000269571 RAD54LQ92698 747 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms