RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 CGNQ9P2M7 1197 aaKnown RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 CPA4Q9UI42 421 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 TBX20Q9UMR3 447 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 EXOC7Q9UPT5 735 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 ZNF236Q9UL36 1845 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 ADGRA3Q8IWK6 1321 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 LGR5O75473 907 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 MARK3P27448 753 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 MAPK4P31152 587 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 RGMBQ6NW40 437 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 MAP4K3Q8IVH8 894 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 C12orf56Q8IXR9 622 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 TMEM143Q96AN5 459 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 FAM167AQ96KS9 214 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 PCIF1Q9H4Z3 704 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 VTA1Q9NP79 307 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 ADGRG1Q9Y653 693 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 EMSYQ7Z589 1322 aa12.65□□□□□ -0.38
SCAF11-201ENST00000266589 KIF2AO00139 706 aaPredicted RBP12.65□□□□□ -0.38
SCAF11-201ENST00000266589 RFC5P40937 340 aa12.65□□□□□ -0.38
SCAF11-201ENST00000266589 TARBP2Q15633 366 aaKnown RBP12.65□□□□□ -0.38
SCAF11-201ENST00000266589 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
SCAF11-201ENST00000266589 CACNA2D4Q7Z3S7 1137 aa12.65□□□□□ -0.38
SCAF11-201ENST00000266589 ZNF592Q92610 1267 aa12.65□□□□□ -0.38
SCAF11-201ENST00000266589 ADGRA2Q96PE1 1338 aa12.65□□□□□ -0.38
SCAF11-201ENST00000266589 SIP14410 1827 aa12.65□□□□□ -0.38
SCAF11-201ENST00000266589 GOLGA6L9A6NEM1 432 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 LRRC53A6NM62 1247 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 NOL4O94818 638 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 SNRPFP62306 86 aaKnown RBP12.65□□□□□ -0.39
SCAF11-201ENST00000266589 APBA1Q02410 837 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 TAF1CQ15572 869 aaPredicted RBP12.65□□□□□ -0.39
SCAF11-201ENST00000266589 RRAGAQ7L523 313 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 RDH13Q8NBN7 331 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 ACRBPQ8NEB7 543 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 TMEM174Q8WUU8 243 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.39
SCAF11-201ENST00000266589 BAP1Q92560 729 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 EDEM3Q9BZQ6 932 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 HSPBP1Q9NZL4 362 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 CEP72Q9P209 647 aa12.65□□□□□ -0.39
SCAF11-201ENST00000266589 PASKQ96RG2 1323 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 H0YCG3 227 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 ARHGAP1Q07960 439 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 BFSP1Q12934 665 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 PPP2R5AQ15172 486 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 EXOC3L4Q17RC7 722 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 GJC2Q5T442 439 aaPredicted RBP12.64□□□□□ -0.39
SCAF11-201ENST00000266589 MAMDC4Q6UXC1 1216 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 XXYLT1Q8NBI6 393 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 ASAP3Q8TDY4 903 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 MAML3Q96JK9 1138 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 ZCCHC17Q9NP64 241 aaKnown RBP12.64□□□□□ -0.39
SCAF11-201ENST00000266589 NLRC4Q9NPP4 1024 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 ARHGAP28Q9P2N2 729 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 PLAGL2Q9UPG8 496 aa12.64□□□□□ -0.39
SCAF11-201ENST00000266589 RBM47A0AV96 593 aaKnown RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 SLC15A5A6NIM6 579 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 ANKRD63C9JTQ0 380 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 NDUFA10O95299 355 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 SNAI1O95863 264 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 SLC10A3P09131 477 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 TRIM49P0CI25 452 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 TRIM49CP0CI26 452 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 GLRA2P23416 452 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 HNRNPH3P31942 346 aaKnown RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 ARL2P36404 184 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 POLR2FP61218 127 aaKnown RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 PDXDC1Q6P996 788 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 GBP6Q6ZN66 633 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 ATP8B4Q8TF62 1192 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 PRIMPOLQ96LW4 560 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 KATNBL1Q9H079 304 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 GANQ9H2C0 597 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 SMARCAD1Q9H4L7 1026 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 GCNT4Q9P109 453 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 KCNG1Q9UIX4 513 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 EPN1Q9Y6I3 576 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 MAFO75444 373 aaPredicted RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 GH1P01241 217 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 ACTN1P12814 892 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 KRT13P13646 458 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 SLC9A1P19634 815 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 PON1P27169 355 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 CNGA1P29973 690 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 ABCD1P33897 745 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 ADCYAP1R1P41586 468 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 CDK17Q00537 523 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 LAMC2Q13753 1193 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 PLCB4Q15147 1175 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 INTS8Q75QN2 995 aaKnown RBP12.63□□□□□ -0.39
SCAF11-201ENST00000266589 NPLOC4Q8TAT6 608 aa12.63□□□□□ -0.39
SCAF11-201ENST00000266589 NHEJ1Q9H9Q4 299 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms