RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CCDC26Q8TAB7 109 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 SLITRK3O94933 977 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 CREB1P16220 341 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 RPL13P26373 211 aaKnown RBP18.19■□□□□ 0.5
SQLE-201ENST00000265896 JAM2P57087 298 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 KIAA1755Q5JYT7 1200 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 LRCH2Q5VUJ6 765 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 EPM2AIP1Q7L775 607 aaPredicted RBP18.19■□□□□ 0.5
SQLE-201ENST00000265896 ZMYM2Q9UBW7 1377 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 TRAPPC3O43617 180 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 SORBS3O60504 671 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 CHN1P15882 459 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 LLGL2Q6P1M3 1020 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 SEPT14Q6ZU15 432 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 ARHGEF19Q8IW93 802 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 ACER1Q8TDN7 264 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 RNF25Q96BH1 459 aaPredicted RBP18.19■□□□□ 0.5
SQLE-201ENST00000265896 INTS2Q9H0H0 1204 aaKnown RBP18.19■□□□□ 0.5
SQLE-201ENST00000265896 VAV3Q9UKW4 847 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 STXBP5LQ9Y2K9 1186 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 DAAM1Q9Y4D1 1078 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 ALG6Q9Y672 507 aa18.19■□□□□ 0.5
SQLE-201ENST00000265896 CLSTN1O94985 981 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 FTLP02792 175 aaPredicted RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 IFI16Q16666 785 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 CNPY4Q8N129 248 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 SLC30A5Q8TAD4 765 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 CCDC127Q96BQ5 260 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 THOC1Q96FV9 657 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 HES6Q96HZ4 224 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 RREB1Q92766 1687 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 DDX3YO15523 660 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 VIMP08670 466 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 ARP10275 920 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 PSMC2P35998 433 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 BYSLQ13895 437 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 CD302Q8IX05 232 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 OLIG1Q8TAK6 271 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 PSMD1Q99460 953 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 GPR88Q9GZN0 384 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 KLC4Q9NSK0 619 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 USP20Q9Y2K6 914 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 TNIP1Q15025 636 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 TTC27Q6P3X3 843 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 RUBCNQ92622 972 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 PRMT1Q99873 361 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 ELAC2Q9BQ52 826 aaKnown RBP18.18■□□□□ 0.5
SQLE-201ENST00000265896 FBXO28Q9NVF7 368 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 FAM198AQ9UFP1 575 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 USP21Q9UK80 565 aa18.18■□□□□ 0.5
SQLE-201ENST00000265896 CLRN2A0PK11 232 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 ACSL3O95573 720 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 FAM182AQ5T1J6 154 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 MICALCLQ6ZW33 695 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 JAMLQ86YT9 394 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 CDAN1Q8IWY9 1227 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 CBWD1Q9BRT8 395 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 KIFC3Q9BVG8 833 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 SUCLA2Q9P2R7 463 aaPredicted RBP18.17■□□□□ 0.5
SQLE-201ENST00000265896 BBOX1O75936 387 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 MMEP08473 750 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 MYL7Q01449 175 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 CRY2Q49AN0 593 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 SYDE2Q5VT97 1194 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 PPP1R18Q6NYC8 613 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 PPP4R3CPQ6ZMV5 832 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 RUFY4Q6ZNE9 571 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 PRUNE1Q86TP1 453 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 CACNA2D3Q8IZS8 1091 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 PARVGQ9HBI0 331 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 GPRC5CQ9NQ84 441 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 BZW2Q9Y6E2 419 aaKnown RBP18.17■□□□□ 0.5
SQLE-201ENST00000265896 SBF2Q86WG5 1849 aa18.17■□□□□ 0.5
SQLE-201ENST00000265896 RPL21P46778 160 aaKnown RBP18.16■□□□□ 0.5
SQLE-201ENST00000265896 ABCB5Q2M3G0 1257 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 LMBR1Q8WVP7 490 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 C1orf54Q8WWF1 131 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 AGPAT3Q9NRZ7 376 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 HOMER2Q9NSB8 354 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 CTNNAL1Q9UBT7 734 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 FRMD4BQ9Y2L6 1034 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 EMSYQ7Z589 1322 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 PITPNM2Q9BZ72 1349 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 GAS7O60861 476 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 RPSAP08865 295 aaKnown RBP18.16■□□□□ 0.5
SQLE-201ENST00000265896 FERP16591 822 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 LONRF1Q17RB8 773 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 RPUSD2Q8IZ73 545 aaKnown RBP18.16■□□□□ 0.5
SQLE-201ENST00000265896 ATG4AQ8WYN0 398 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 DDX23Q9BUQ8 820 aaKnown RBP18.16■□□□□ 0.5
SQLE-201ENST00000265896 VCPKMTQ9H867 229 aa18.16■□□□□ 0.5
SQLE-201ENST00000265896 TCP10L2B9ZVM9 353 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 SGPL1O95470 568 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 PRKCIP41743 596 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 CDR1P51861 262 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 PMS2P54278 862 aa18.15■□□□□ 0.5
SQLE-201ENST00000265896 ZKSCAN8Q15776 578 aaPredicted RBP18.15■□□□□ 0.5
SQLE-201ENST00000265896 HS2ST1Q7LGA3 356 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms