RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 RC3H2Q9HBD1 1191 aaKnown RBP9.37□□□□□ -0.91
ERCC8-201ENST00000265038 DENND3A2RUS2 1198 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 EPOPA6NHQ4 379 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 DGKIO75912 1065 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 EYA4O95677 639 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 ZSCAN22P10073 491 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 LONP1P36776 959 aaKnown RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 SARSP49591 514 aaKnown RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 PTENP60484 403 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 POU5F1BQ06416 359 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 CAPSQ13938 189 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 MXD4Q14582 209 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 SRGAP1Q7Z6B7 1085 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 NPAS4Q8IUM7 802 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 MCPH1Q8NEM0 835 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 AK8Q96MA6 479 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 PLIN2Q99541 437 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 INO80BQ9C086 356 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 POLD4Q9HCU8 107 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 C1orf112Q9NSG2 853 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 FBXO2Q9UK22 296 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 DNM3Q9UQ16 869 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 RFXAPO00287 272 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 F13A1P00488 732 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 ZSCAN20P17040 1043 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 SFPQP23246 707 aaKnown RBP eCLIP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 NASPP49321 788 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 ADGRE1Q14246 886 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 SLC39A14Q15043 492 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 ZRSR1Q15695 479 aaKnown RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 TMEM119Q4V9L6 283 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 FAM102BQ5T8I3 360 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 CABP7Q86V35 215 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 IFNLR1Q8IU57 520 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 LRRC15Q8TF66 581 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 BSNDQ8WZ55 320 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 CSRNP2Q9H175 543 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 TFIP11Q9UBB9 837 aaKnown RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 STXBP5LQ9Y2K9 1186 aa9.36□□□□□ -0.91
ERCC8-201ENST00000265038 SRPRBQ9Y5M8 271 aaKnown RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 MORC2Q9Y6X9 1032 aaPredicted RBP9.36□□□□□ -0.91
ERCC8-201ENST00000265038 LINC00271P0C7V0 271 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 STAG3L1P0CL83 205 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 IBSPP21815 317 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-201ENST00000265038 HOXA11P31270 313 aaPredicted RBP9.35□□□□□ -0.91
ERCC8-201ENST00000265038 GATMP50440 423 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 ERVK-21P61565 698 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 SPECC1Q5M775 1068 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 C1orf186Q6ZWK4 172 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 USP49Q70CQ1 688 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 CATSPER4Q7RTX7 472 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 LINC00301Q8NCQ3 95 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 CLIC6Q96NY7 704 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 TGS1Q96RS0 853 aaKnown RBP9.35□□□□□ -0.91
ERCC8-201ENST00000265038 RUSC1Q9BVN2 902 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 NT5C3AQ9H0P0 336 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
ERCC8-201ENST00000265038 ZDHHC9Q9Y397 364 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 PCDHB7Q9Y5E2 793 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 SZT2Q5T011 3432 aa9.35□□□□□ -0.91
ERCC8-201ENST00000265038 A0A0U1RQF3 1178 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 SLC26A4O43511 780 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 UBA7P41226 1012 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 PHKA2P46019 1235 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 MBTD1Q05BQ5 628 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 TFDP1Q14186 410 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 AMHR2Q16671 573 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 RINT1Q6NUQ1 792 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 ECHDC2Q86YB7 292 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 DAW1Q8N136 415 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 SYT2Q8N9I0 419 aaPredicted RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 ARNTL2Q8WYA1 636 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 EPSTI1Q96J88 318 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 C17orf80Q9BSJ5 609 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 TRAIPQ9BWF2 469 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 NFKBIZQ9BYH8 718 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 AGPAT5Q9NUQ2 364 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 RNF19AQ9NV58 838 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 TMEM161AQ9NX61 479 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 LRFN2Q9ULH4 789 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 PIN4Q9Y237 131 aaKnown RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 SIP14410 1827 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 KAT6AQ92794 2004 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 INO80B-WBP1J3KQ70 363 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 FGFR1P11362 822 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 ATF7P17544 494 aaPredicted RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 SLC12A3P55017 1021 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 KARSQ15046 597 aaKnown RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 ZNF598Q86UK7 904 aaKnown RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 CDK5RAP3Q96JB5 506 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 ZNF396Q96N95 335 aaPredicted RBP9.34□□□□□ -0.91
ERCC8-201ENST00000265038 CCSER1Q9C0I3 900 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 BLOC1S4Q9NUP1 217 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 MTUS1Q9ULD2 1270 aa9.34□□□□□ -0.91
ERCC8-201ENST00000265038 ADGRA3Q8IWK6 1321 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms