RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 DENND3A2RUS2 1198 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 ZBTB48P10074 688 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-201ENST00000263559 PON1P27169 355 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
VPS26A-201ENST00000263559 CYLC1P35663 651 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-201ENST00000263559 STAT5BP51692 787 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 POLGP54098 1239 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-201ENST00000263559 EXOC3L4Q17RC7 722 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 CELF3Q5SZQ8 465 aaKnown RBP17.29■□□□□ 0.36
VPS26A-201ENST00000263559 C12orf56Q8IXR9 622 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
VPS26A-201ENST00000263559 NIFKQ9BYG3 293 aaKnown RBP17.29■□□□□ 0.36
VPS26A-201ENST00000263559 POLR3FQ9H1D9 316 aaPredicted RBP17.29■□□□□ 0.36
VPS26A-201ENST00000263559 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
VPS26A-201ENST00000263559 RTP1P59025 263 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 EMC2Q15006 297 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 TMEM63BQ5T3F8 832 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 CCDC62Q6P9F0 684 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 PLCB1Q9NQ66 1216 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 PDGFCQ9NRA1 345 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 MORF4L1Q9UBU8 362 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 ADGRA3Q8IWK6 1321 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 ASB14A6NK59 587 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 ADORA2AP29274 412 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 ARHGAP25P42331 645 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 FAM160B1Q5W0V3 765 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 GBP6Q6ZN66 633 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 MAP4K3Q8IVH8 894 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 ZSWIM2Q8NEG5 633 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 AFAP1L1Q8TED9 768 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 CEP89Q96ST8 783 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 DHX33Q9H6R0 707 aaKnown RBP17.28■□□□□ 0.36
VPS26A-201ENST00000263559 HSPBP1Q9NZL4 362 aa17.28■□□□□ 0.36
VPS26A-201ENST00000263559 LOC102724159A0A0B4J2E5 919 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 EIF3CLB5ME19 914 aaKnown RBP17.27■□□□□ 0.36
VPS26A-201ENST00000263559 ANKRD63C9JTQ0 380 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 PWP2Q15269 919 aaKnown RBP17.27■□□□□ 0.36
VPS26A-201ENST00000263559 ZNF792Q3KQV3 632 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 COPS5Q92905 334 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 HVCN1Q96D96 273 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 CCDC42Q96M95 316 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 EIF3CQ99613 913 aaKnown RBP17.27■□□□□ 0.36
VPS26A-201ENST00000263559 GPR20Q99678 358 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 NRBP2Q9NSY0 501 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 EXOC7Q9UPT5 735 aa17.27■□□□□ 0.36
VPS26A-201ENST00000263559 TRIM49P0CI25 452 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 TRIM49CP0CI26 452 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 FMO5P49326 533 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 SNRPFP62306 86 aaKnown RBP17.27■□□□□ 0.35
VPS26A-201ENST00000263559 BFSP1Q12934 665 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 PPP2R5AQ15172 486 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 KLHDC7AQ5VTJ3 777 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 ARMCX2Q7L311 632 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 XXYLT1Q8NBI6 393 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 TMEM143Q96AN5 459 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 IFT74Q96LB3 600 aa17.27■□□□□ 0.35
VPS26A-201ENST00000263559 GTPBP10A4D1E9 387 aaKnown RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 TLR2O60603 784 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 TXNP10599 105 aaKnown RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 ADSSP30520 456 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 EIF4A3P38919 411 aaKnown RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 KRT83P78385 493 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 SFMBT2Q5VUG0 894 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 DHX37Q8IY37 1157 aaKnown RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 NUCKS1Q9H1E3 243 aaKnown RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 GCNT4Q9P109 453 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 CNGA1P29973 690 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 CASQ1P31415 396 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 TARBP2Q15633 366 aaKnown RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 HGSNATQ68CP4 663 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 SYN2Q92777 582 aaPredicted RBP17.26■□□□□ 0.35
VPS26A-201ENST00000263559 AZI2Q9H6S1 392 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 SIX2Q9NPC8 291 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 TFR2Q9UP52 801 aa17.26■□□□□ 0.35
VPS26A-201ENST00000263559 NOP56O00567 594 aaKnown RBP17.25■□□□□ 0.35
VPS26A-201ENST00000263559 UCHL3P15374 230 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 CYP27A1Q02318 531 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 CBWD6Q4V339 395 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 CBWD3Q5JTY5 395 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 CBWD5Q5RIA9 395 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 SLC7A3Q8WY07 619 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 TSC1Q92574 1164 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 SPATA33Q96N06 139 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 ZNF263O14978 683 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 STRNO43815 780 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 KIF5CO60282 957 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 HUNKP57058 714 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 DLG4P78352 724 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 INTS8Q75QN2 995 aaKnown RBP17.25■□□□□ 0.35
VPS26A-201ENST00000263559 TAS1R3Q7RTX0 852 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 TRIM50Q86XT4 487 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 ASAP3Q8TDY4 903 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 GLG1Q92896 1179 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
VPS26A-201ENST00000263559 L2HGDHQ9H9P8 463 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 ARHGAP28Q9P2N2 729 aa17.25■□□□□ 0.35
VPS26A-201ENST00000263559 FHOD1Q9Y613 1164 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms