RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MIS18BP1Q6P0N0 1132 aa12.88□□□□□ -0.35
SMG6-201ENST00000263073 POTEGQ6S5H5 508 aa12.88□□□□□ -0.35
SMG6-201ENST00000263073 POTEEQ6S8J3 1075 aa12.88□□□□□ -0.35
SMG6-201ENST00000263073 HACE1Q8IYU2 909 aa12.88□□□□□ -0.35
SMG6-201ENST00000263073 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
SMG6-201ENST00000263073 CAPRIN1Q14444 709 aaKnown RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 OLFML2BQ68BL8 750 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 ATP6V0A1Q93050 837 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 BPIFA3Q9BQP9 254 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 GPR108Q9NPR9 543 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 SYNGAP1Q96PV0 1343 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 MAGI3Q5TCQ9 1506 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 KDM5DQ9BY66 1539 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 RNF103-CHMP3A0A140T963 221 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 MYL1P05976 194 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 BMP3P12645 472 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 PMLP29590 882 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 CUL3Q13618 768 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 DRAP1Q14919 205 aaPredicted RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 CCDC85BQ15834 202 aaPredicted RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 SZRD1Q7Z422 152 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 METTL16Q86W50 562 aaKnown RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 BTBD6Q96KE9 485 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 AS3MTQ9HBK9 375 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 NPHS2Q9NP85 383 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 MARCOQ9UEW3 520 aaPredicted RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 FAM205CA6NFA0 338 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 SLC16A4O15374 487 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 ICA1LQ8NDH6 482 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 RAD54LQ92698 747 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 CSADQ9Y600 493 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 ERVK-7P63135 1459 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 TTI1O43156 1089 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 MED7O43513 233 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 KRT37O76014 449 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 TTC30BQ8N4P2 665 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 STRBPQ96SI9 672 aaKnown RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 FAM213AQ9BRX8 229 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 LY9Q9HBG7 655 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 TSPOAP1O95153 1857 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 ZRANB2O95218 330 aaKnown RBP eCLIP12.87□□□□□ -0.35
SMG6-201ENST00000263073 CYP2E1P05181 493 aaPredicted RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 MDH1P40925 334 aaKnown RBP12.87□□□□□ -0.35
SMG6-201ENST00000263073 NBPF9Q3BBW0 867 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 PPP4R4Q6NUP7 873 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 LRRC4Q9HBW1 653 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 PNMA2Q9UL42 364 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
SMG6-201ENST00000263073 ARMC2Q8NEN0 867 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 L3MBTL1Q9Y468 752 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 MEFVO15553 781 aaPredicted RBP12.86□□□□□ -0.35
SMG6-201ENST00000263073 ARHGDIAP52565 204 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 KRT17Q04695 432 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 TFDP1Q14186 410 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 SLC27A3Q5K4L6 730 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 KDELC2Q7Z4H8 507 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 KIRREL3Q8IZU9 778 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 PIK3R5Q8WYR1 880 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 CYFIP2Q96F07 1278 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 CCT8L2Q96SF2 557 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 EPN3Q9H201 632 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 CXorf56Q9H5V9 222 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 ARHGAP26Q9UNA1 814 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 UBTFL6P0CB48 400 aaPredicted RBP12.86□□□□□ -0.35
SMG6-201ENST00000263073 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
SMG6-201ENST00000263073 LMBRD2Q68DH5 695 aaPredicted RBP12.86□□□□□ -0.35
SMG6-201ENST00000263073 ANKRD40Q6AI12 368 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 SIX6OS1Q8N1H7 587 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 AGPAT5Q9NUQ2 364 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 LIFRP42702 1097 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
SMG6-201ENST00000263073 RASSF3Q86WH2 238 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 OR6B3Q8NGW1 331 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 STK32BQ9NY57 414 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 EHD2Q9NZN4 543 aa12.86□□□□□ -0.35
SMG6-201ENST00000263073 PPEF1O14829 653 aaPredicted RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 GCFC2P16383 781 aaKnown RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 TMEM154Q6P9G4 183 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 NLRP10Q86W26 655 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 WDR11Q9BZH6 1224 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 SERPINB13Q9UIV8 391 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 HPCAL4Q9UM19 191 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 NEMP1O14524 444 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 COPS2P61201 443 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 OCA2Q04671 838 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 BTKQ06187 659 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 DDX42Q86XP3 938 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMG6-201ENST00000263073 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
SMG6-201ENST00000263073 SARS2Q9NP81 518 aaKnown RBP12.85□□□□□ -0.35
SMG6-201ENST00000263073 KLHL8Q9P2G9 620 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms