RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 GCOM1H8Y6P7 765 aaPredicted RBP10.65□□□□□ -0.71
TTC39A-201ENST00000262675 M0R2N6 131 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 KIF5CO60282 957 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 RPLP2P05387 115 aaKnown RBP10.65□□□□□ -0.71
TTC39A-201ENST00000262675 POLR2MP0CAP2 368 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.71
TTC39A-201ENST00000262675 DEFB103AP81534 67 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 HTRA4P83105 476 aaPredicted RBP10.65□□□□□ -0.71
TTC39A-201ENST00000262675 NEDD9Q14511 834 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 PGM5Q15124 567 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 ZNF618Q5T7W0 954 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 RRAGBQ5VZM2 374 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 XRRA1Q6P2D8 792 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 TMCO3Q6UWJ1 677 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 FAM43BQ6ZT52 329 aaPredicted RBP10.65□□□□□ -0.71
TTC39A-201ENST00000262675 C4orf32Q8N8J7 132 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 SP7Q8TDD2 431 aaPredicted RBP10.65□□□□□ -0.71
TTC39A-201ENST00000262675 RABGGTAQ92696 567 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 IQCDQ96DY2 449 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 SPZ1Q9BXG8 430 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 UBE2ZQ9H832 354 aaPredicted RBP10.65□□□□□ -0.71
TTC39A-201ENST00000262675 SUGCTQ9HAC7 445 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 MLXIPQ9HAP2 919 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 VAT1LQ9HCJ6 419 aa10.65□□□□□ -0.71
TTC39A-201ENST00000262675 PRUNE2Q8WUY3 3088 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 PI4K2BG5E9Z4 385 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 GGPS1O95749 300 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 RPN1P04843 607 aaKnown RBP10.64□□□□□ -0.71
TTC39A-201ENST00000262675 TUBBP07437 444 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 ZNF286BP0CG31 522 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 MYCLP12524 364 aaPredicted RBP10.64□□□□□ -0.71
TTC39A-201ENST00000262675 EEF1GP26641 437 aaKnown RBP10.64□□□□□ -0.71
TTC39A-201ENST00000262675 HOXC8P31273 242 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 MCM7P33993 719 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 STAT6P42226 847 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 KLHL10Q6JEL2 608 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 CEP112Q8N8E3 955 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 GDPD5Q8WTR4 605 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 MRPL38Q96DV4 380 aaKnown RBP10.64□□□□□ -0.71
TTC39A-201ENST00000262675 LRFN3Q9BTN0 628 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 CPVLQ9H3G5 476 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 DISC1Q9NRI5 854 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 BARHL2Q9NY43 387 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 RWDD3Q9Y3V2 267 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 ADGRG1Q9Y653 693 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 RALGAPA2Q2PPJ7 1873 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 EYSQ5T1H1 3165 aa10.64□□□□□ -0.71
TTC39A-201ENST00000262675 A0A1W2PQC6 194 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 hCG_1642624A0A1W2PR95 340 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 LCHNA4D1U4 455 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 PALM3A6NDB9 673 aaPredicted RBP10.63□□□□□ -0.71
TTC39A-201ENST00000262675 H3BRB1 525 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 N4BP3O15049 544 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 ARHGEF15O94989 841 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 GNA11P29992 359 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 ICAM3P32942 547 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 THPOP40225 353 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 PLEKHG4Q58EX7 1191 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 TRAF7Q6Q0C0 670 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 CYP26C1Q6V0L0 522 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 TOGARAM2Q6ZUX3 1019 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 GIMAP8Q8ND71 665 aaPredicted RBP10.63□□□□□ -0.71
TTC39A-201ENST00000262675 ATP6V0A1Q93050 837 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 THAP9Q9H5L6 903 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
TTC39A-201ENST00000262675 MAD2L2Q9UI95 211 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 NOP56O00567 594 aaKnown RBP10.63□□□□□ -0.71
TTC39A-201ENST00000262675 TEX33O43247 280 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 ALADP13716 330 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 UBA7P41226 1012 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 COPB1P53618 953 aaKnown RBP10.63□□□□□ -0.71
TTC39A-201ENST00000262675 PPP2R3AQ06190 1150 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 KRT31Q15323 416 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 TCP11X2Q5H9J9 407 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 NELFBQ8WX92 580 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 C16orf70Q9BSU1 422 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 RIOX1Q9H6W3 641 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.63□□□□□ -0.71
TTC39A-201ENST00000262675 PRDM4Q9UKN5 801 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 CTNND2Q9UQB3 1225 aa10.63□□□□□ -0.71
TTC39A-201ENST00000262675 V9GYY5 206 aaPredicted RBP10.63□□□□□ -0.71
TTC39A-201ENST00000262675 BDP1A6H8Y1 2624 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 PNMA6FA0A0J9YX94 578 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 PSMA7O14818 248 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 RHOBTB3O94955 611 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 UBA1P22314 1058 aaKnown RBP10.62□□□□□ -0.71
TTC39A-201ENST00000262675 CLCN6P51797 869 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 STX17P56962 302 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 AMPD3Q01432 767 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 MKRN4PQ13434 485 aaPredicted RBP10.62□□□□□ -0.71
TTC39A-201ENST00000262675 COBLL1Q53SF7 1204 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 HSP90AA4PQ58FG1 418 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 RSRC2Q7L4I2 434 aaKnown RBP10.62□□□□□ -0.71
TTC39A-201ENST00000262675 ADSSL1Q8N142 457 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 PPP1R13LQ8WUF5 828 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 GOLGA1Q92805 767 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 DHTKD1Q96HY7 919 aaPredicted RBP10.62□□□□□ -0.71
TTC39A-201ENST00000262675 CARD6Q9BX69 1037 aa10.62□□□□□ -0.71
TTC39A-201ENST00000262675 ZMYND12Q9H0C1 365 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms