RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 GINS2Q9Y248 185 aa18.4■□□□□ 0.54
CHCHD3-201ENST00000262570 A0A087WZ62 844 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 PARNO95453 639 aaKnown RBP18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 MYL1P05976 194 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 SRGAP2CP0DJJ0 459 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 SYN1P17600 705 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 CUL4BQ13620 913 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 GPNMBQ14956 572 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 RNF149Q8NC42 400 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 NLRP7Q8WX94 980 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 SCLYQ96I15 445 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 OSMRQ99650 979 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 FDXACB1Q9BRP7 624 aaPredicted RBP18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 PCDH10Q9P2E7 1040 aa18.39■□□□□ 0.53
CHCHD3-201ENST00000262570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 FRMD3A2A2Y4 597 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 KINO60870 393 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 TBCAO75347 108 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 FAM13AO94988 1023 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 PLS3P13797 630 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 CASP1P29466 404 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 NAMPTP43490 491 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 MDM2Q00987 491 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 TFDP1Q14186 410 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 PPP2R5AQ15172 486 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 ELOA2Q8IYF1 753 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 TMEM40Q8WWA1 233 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 CCDC34Q96HJ3 373 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 IFT74Q96LB3 600 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 NTPCRQ9BSD7 190 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 OSBPL7Q9BZF2 842 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 BLZF1Q9H2G9 400 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 PARVGQ9HBI0 331 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 LARSQ9P2J5 1176 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 SQORQ9Y6N5 450 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 TNRC18O15417 2968 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 GTPBP6O43824 516 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 NBNO60934 754 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 DARSP14868 501 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 EIF4BP23588 611 aaKnown RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 NPTX2P47972 431 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 PEX3P56589 373 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 PTENP60484 403 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 DMP1Q13316 513 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 FBXO47Q5MNV8 452 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 IFNLR1Q8IU57 520 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 TMEM199Q8N511 208 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 SCLT1Q96NL6 688 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 NFKBIZQ9BYH8 718 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 GCOM2Q9BZD3 368 aaPredicted RBP18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 KCNG1Q9UIX4 513 aa18.38■□□□□ 0.53
CHCHD3-201ENST00000262570 LRRIQ4A6NIV6 560 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 IDEP14735 1019 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 ASIC1P78348 528 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 LPIN1Q14693 890 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 ODR4Q5SWX8 454 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 CDCA2Q69YH5 1023 aaPredicted RBP18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 MYCT1Q8N699 235 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 GPT2Q8TD30 523 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 SPIRE2Q8WWL2 714 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 BADQ92934 168 aa18.37■□□□□ 0.53
CHCHD3-201ENST00000262570 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 PVALEFA0A1B0GWK0 134 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 CXCL10P02778 98 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 PRR29P0C7W0 189 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 GHRP10912 638 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 CSF2RAP15509 400 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 RFC2P35250 354 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 PHKA2P46019 1235 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 DPYDQ12882 1025 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 POSTNQ15063 836 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 UNC13DQ70J99 1090 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 SRGAP1Q7Z6B7 1085 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 CCDC65Q8IXS2 484 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 USP38Q8NB14 1042 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 VWCEQ96DN2 955 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 FIZ1Q96SL8 496 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 INO80BQ9C086 356 aaPredicted RBP18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 ZHX3Q9H4I2 956 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 MINDY3Q9H8M7 445 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 PANK4Q9NVE7 773 aa18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 NOC2LQ9Y3T9 749 aaKnown RBP18.36■□□□□ 0.53
CHCHD3-201ENST00000262570 CCDC169A6NNP5 214 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 TRAK2O60296 914 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 CSDE1O75534 798 aaKnown RBP18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 GAP43P17677 238 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 SMTNP53814 917 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 MLLT1Q03111 559 aaPredicted RBP18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 TSHZ1Q6ZSZ6 1077 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 DEPTORQ8TB45 409 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 KIFC3Q9BVG8 833 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 AGO3Q9H9G7 860 aaKnown RBP18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 KMT5AQ9NQR1 393 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 ARHGAP28Q9P2N2 729 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 SEL1LQ9UBV2 794 aa18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 HOOK1Q9UJC3 728 aaKnown RBP18.35■□□□□ 0.53
CHCHD3-201ENST00000262570 RBAK-RBAKDNI3L0D1 243 aa18.34■□□□□ 0.53
CHCHD3-201ENST00000262570 KLRC4O43908 158 aa18.34■□□□□ 0.53
CHCHD3-201ENST00000262570 RPS6KA5O75582 802 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms