RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 FAM107AO95990 144 aa24.53■■□□□ 1.52
MCF2L-201ENST00000261963 CAP2P40123 477 aa24.53■■□□□ 1.52
MCF2L-201ENST00000261963 MDH1P40925 334 aaKnown RBP24.53■■□□□ 1.52
MCF2L-201ENST00000261963 OGFOD1Q8N543 542 aa24.53■■□□□ 1.52
MCF2L-201ENST00000261963 ZNF277Q9NRM2 450 aaPredicted RBP24.53■■□□□ 1.52
MCF2L-201ENST00000261963 FEM1BQ9UK73 627 aa24.53■■□□□ 1.52
MCF2L-201ENST00000261963 SEC24CP53992 1094 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 LARGE2Q8N3Y3 721 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 LRRC57Q8N9N7 239 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 OLIG1Q8TAK6 271 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 LXNQ9BS40 222 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 MKNK1Q9BUB5 465 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 DMAC2Q9NW81 257 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 TNS1Q9HBL0 1735 aaKnown RBP24.52■■□□□ 1.52
MCF2L-201ENST00000261963 UBE4BO95155 1302 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 GOLGA6L7A0A1B0GV03 622 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 SRRM3A6NNA2 597 aaPredicted RBP24.52■■□□□ 1.52
MCF2L-201ENST00000261963 CLSTN1O94985 981 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 ANXA13P27216 316 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 ZNF772Q68DY9 489 aaPredicted RBP24.52■■□□□ 1.52
MCF2L-201ENST00000261963 CD302Q8IX05 232 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 FAM178BQ8IXR5 827 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 TEKT3Q9BXF9 490 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 DEFB129Q9H1M3 183 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 GOLPH3Q9H4A6 298 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 ACTR5Q9H9F9 607 aaPredicted RBP24.52■■□□□ 1.52
MCF2L-201ENST00000261963 AGPAT3Q9NRZ7 376 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 PGAP2Q9UHJ9 254 aa24.52■■□□□ 1.52
MCF2L-201ENST00000261963 IPO5O00410 1097 aaKnown RBP24.51■■□□□ 1.51
MCF2L-201ENST00000261963 GLI1P08151 1106 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 SATB1Q01826 763 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 SNCBQ16143 134 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 FKBP1CQ5VVH2 108 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 PSMD1Q99460 953 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 KCND2Q9NZV8 630 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 CCDC189A1A4V9 331 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 DDX3XO00571 662 aaKnown RBP eCLIP24.51■■□□□ 1.51
MCF2L-201ENST00000261963 ITGB5P18084 799 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 PTGER2P43116 358 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 C6orf89Q6UWU4 347 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 CCDC121Q6ZUS5 278 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 DAW1Q8N136 415 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 CCDC114Q96M63 670 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 AGBL1Q96MI9 1066 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 MXRA8Q9BRK3 442 aa24.51■■□□□ 1.51
MCF2L-201ENST00000261963 FLOT1O75955 427 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 FMO5P49326 533 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 MAPK7Q13164 816 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 ODR4Q5SWX8 454 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 CCDC50Q8IVM0 306 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 ATP6V1G3Q96LB4 118 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 STRA6Q9BX79 667 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 COL20A1Q9P218 1284 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 ZNF536O15090 1300 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 E7EVH7 732 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 HSD17B4P51659 736 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 PAK2Q13177 524 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 C1orf131Q8NDD1 294 aaKnown RBP24.5■■□□□ 1.51
MCF2L-201ENST00000261963 GDF3Q9NR23 364 aa24.5■■□□□ 1.51
MCF2L-201ENST00000261963 CYP2J2P51589 502 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 CBWD6Q4V339 395 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 CBWD3Q5JTY5 395 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 CBWD5Q5RIA9 395 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 HS2ST1Q7LGA3 356 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 PARP9Q8IXQ6 854 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 RTKN2Q8IZC4 609 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 TTLL6Q8N841 843 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 RIT2Q99578 217 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 NFU1Q9UMS0 254 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 ATP8B3O60423 1300 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 HMGB1P1B2RPK0 211 aaPredicted RBP24.49■■□□□ 1.51
MCF2L-201ENST00000261963 PPP1R12BO60237 982 aaPredicted RBP24.49■■□□□ 1.51
MCF2L-201ENST00000261963 GFPT2O94808 682 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 KIF4AO95239 1232 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 ZBTB48P10074 688 aaPredicted RBP24.49■■□□□ 1.51
MCF2L-201ENST00000261963 RPS6KA1Q15418 735 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 MREGQ8N565 214 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 IL31RAQ8NI17 732 aa24.49■■□□□ 1.51
MCF2L-201ENST00000261963 ZSCAN5CA6NGD5 496 aaPredicted RBP24.48■■□□□ 1.51
MCF2L-201ENST00000261963 HIP1RO75146 1068 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 FAM153BP0C7A2 387 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 FERP16591 822 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 CARSP49589 748 aaKnown RBP24.48■■□□□ 1.51
MCF2L-201ENST00000261963 RNASE9P60153 205 aaKnown RBP24.48■■□□□ 1.51
MCF2L-201ENST00000261963 FAM153CQ494X1 144 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 FAM83AQ86UY5 434 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 CEP57Q86XR8 500 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 USP38Q8NB14 1042 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 TPCN2Q8NHX9 752 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 FAM153AQ9UHL3 310 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 TMEM59LQ9UK28 342 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 RPTORQ8N122 1335 aa24.48■■□□□ 1.51
MCF2L-201ENST00000261963 F8VZ95 297 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 DDX39AO00148 427 aaKnown RBP24.47■■□□□ 1.51
MCF2L-201ENST00000261963 CES2O00748 559 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 EVI5O60447 810 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 TRIM49P0CI25 452 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 TRIM49CP0CI26 452 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 STAT1P42224 750 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 LNX1Q8TBB1 728 aaPredicted RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms