RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 DRD4P21917 467 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNX1-201ENST00000261889 SMTNP53814 917 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 TMEM119Q4V9L6 283 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 FAM47EQ6ZV65 393 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 LRRC45Q96CN5 670 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 HOOK2Q96ED9 719 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 YY1AP1Q9H869 796 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 MTMR4Q9NYA4 1195 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 C10orf71Q711Q0 1435 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 ZYXQ15942 572 aaKnown RBP14.08□□□□□ -0.16
SNX1-201ENST00000261889 C1orf54Q8WWF1 131 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 DHX36Q9H2U1 1008 aaKnown RBP14.08□□□□□ -0.16
SNX1-201ENST00000261889 RIC8AQ9NPQ8 531 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 PCDHA2Q9Y5H9 948 aa14.08□□□□□ -0.16
SNX1-201ENST00000261889 TMEM150BA6NC51 233 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 EML1O00423 815 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 MYCT1Q8N699 235 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 CTTNBP2NLQ9P2B4 639 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 TSKSQ9UJT2 592 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 FAM86B1E9PN63 330 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 FAM86B2P0C5J1 330 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 GSCP56915 257 aaPredicted RBP14.07□□□□□ -0.16
SNX1-201ENST00000261889 DLG4P78352 724 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 QRICH1Q2TAL8 776 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 TATDN2Q93075 761 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 DNAJC12Q9UKB3 198 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 AMFRQ9UKV5 643 aa14.07□□□□□ -0.16
SNX1-201ENST00000261889 GOLGA8IPA6NC78 632 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 GOLGA8JA6NMD2 632 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 RGS16O15492 202 aaPredicted RBP14.06□□□□□ -0.16
SNX1-201ENST00000261889 FLOT1O75955 427 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 CRY2Q49AN0 593 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 TTC27Q6P3X3 843 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 C16orf86Q6ZW13 317 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 CUL5Q93034 780 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 CHMP6Q96FZ7 201 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 SGIP1Q9BQI5 828 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 INTS9Q9NV88 658 aaKnown RBP14.06□□□□□ -0.16
SNX1-201ENST00000261889 TMEM59LQ9UK28 342 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 UBOX5O94941 541 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 RPL21P46778 160 aaKnown RBP14.06□□□□□ -0.16
SNX1-201ENST00000261889 GIT2Q14161 759 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 SLC35C1Q96A29 364 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 SGSM3Q96HU1 749 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 EPB41L4BQ9H329 900 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 NOD2Q9HC29 1040 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 CD209Q9NNX6 404 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 DAAM1Q9Y4D1 1078 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 NEDD9Q14511 834 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 GALNT17Q6IS24 598 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 TPTE2Q6XPS3 522 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 SLC30A5Q8TAD4 765 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 NSMCE1Q8WV22 266 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 PLCD4Q9BRC7 762 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 TRIM7Q9C029 511 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 SIX2Q9NPC8 291 aa14.06□□□□□ -0.16
SNX1-201ENST00000261889 DLATP10515 647 aaKnown RBP14.05□□□□□ -0.16
SNX1-201ENST00000261889 ZNF76P36508 570 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 RBM5P52756 815 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNX1-201ENST00000261889 PMS2P54278 862 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 RHBDL3P58872 404 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 ELF3P78545 371 aaPredicted RBP14.05□□□□□ -0.16
SNX1-201ENST00000261889 KNOP1Q1ED39 458 aaKnown RBP14.05□□□□□ -0.16
SNX1-201ENST00000261889 DENND2CQ68D51 928 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 TRIM68Q6AZZ1 485 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 PPP1R18Q6NYC8 613 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 JAMLQ86YT9 394 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 KIAA0825Q8IV33 1275 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 ARFGAP2Q8N6H7 521 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 USP20Q9Y2K6 914 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 SMCHD1A6NHR9 2005 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 FOXN3O00409 490 aaPredicted RBP14.05□□□□□ -0.16
SNX1-201ENST00000261889 LGR5O75473 907 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 TNFRSF8P28908 595 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 RBM26Q5T8P6 1007 aaKnown RBP14.05□□□□□ -0.16
SNX1-201ENST00000261889 RUFY4Q6ZNE9 571 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 CCDC105Q8IYK2 499 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 WDR66Q8TBY9 1149 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 CTNNBL1Q8WYA6 563 aaPredicted RBP14.05□□□□□ -0.16
SNX1-201ENST00000261889 ANO3Q9BYT9 981 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 ARHGEF10LQ9HCE6 1279 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNX1-201ENST00000261889 MCM8Q9UJA3 840 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 ASTN1O14525 1302 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 CEP350Q5VT06 3117 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 TCP11X1B4DZS4 312 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 SORBS3O60504 671 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 EPHA7Q15375 998 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 PPP4R3AQ6IN85 833 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 MREGQ8N565 214 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 CCDC63Q8NA47 563 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 CCDC197Q8NCU1 140 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 CCT6BQ92526 530 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 VEZTQ9HBM0 779 aa14.05□□□□□ -0.16
SNX1-201ENST00000261889 DIAPH2O60879 1101 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 TBCAO75347 108 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms