RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 LRCH1Q9Y2L9 728 aa7.79□□□□□ -1.16
CSDE1-201ENST00000261443 RTCBQ9Y3I0 505 aaKnown RBP7.79□□□□□ -1.16
CSDE1-201ENST00000261443 DUOX1Q9NRD9 1551 aa7.79□□□□□ -1.16
CSDE1-201ENST00000261443 A0A0A6YYK5 440 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 LGR5O75473 907 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 LMNAP02545 664 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 SKIP12755 728 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 KCNA3P22001 575 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 EPHB2P29323 1055 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ATP5DP30049 168 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 VHLP40337 213 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 RPL21P46778 160 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 CACNA2D1P54289 1103 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ZNF211Q13398 564 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ACVR2BQ13705 512 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 BICDL1Q6ZP65 573 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ADGRA1Q86SQ6 560 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 VPS36Q86VN1 386 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 TRIM59Q8IWR1 403 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 LRRC8CQ8TDW0 803 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 FBXO41Q8TF61 875 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 INPP5DQ92835 1189 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 GRAMD1AQ96CP6 724 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 GBP5Q96PP8 586 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 TBC1D10AQ9BXI6 508 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 DMAP1Q9NPF5 467 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 BLOC1S4Q9NUP1 217 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 STOML1Q9UBI4 398 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ABCF2Q9UG63 623 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 DIS3Q9Y2L1 958 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 SMAPO00193 183 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ATP9AO75110 1047 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 GNA14O95837 355 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 RARGP13631 454 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 LMNB2Q03252 620 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 GRB10Q13322 594 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 MTFR1Q15390 333 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 DCAF12L1Q5VU92 463 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 KIF6Q6ZMV9 814 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ZC3H18Q86VM9 953 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 NCAPG2Q86XI2 1143 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 DDX12PQ92771 950 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 OPTNQ96CV9 577 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 C18orf8Q96DM3 657 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 CEP63Q96MT8 703 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 RUNDC3BQ96NL0 473 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 LRRC37BQ96QE4 947 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 KIAA1683Q9H0B3 1180 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 USP40Q9NVE5 1235 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 STK17AQ9UEE5 414 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ARMCX3Q9UH62 379 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 PCDH11XQ9BZA7 1347 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 BAZ2AQ9UIF9 1905 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 BCL9O00512 1426 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 PDLIM1O00151 329 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 DDX3YO15523 660 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 PCP11498 1178 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 BRAFP15056 766 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 PLCG2P16885 1265 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 RASA1P20936 1047 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 GSTT1P30711 240 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 TXKP42681 527 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 SERPINB4P48594 390 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 RASSF2P50749 326 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 BCAMP50895 628 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 POLGP54098 1239 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 NPEPPSP55786 919 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 KCNH2Q12809 1159 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ZNF449Q6P9G9 518 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 FAM47EQ6ZV65 393 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 ZNF513Q8N8E2 541 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 U2AF1L4Q8WU68 220 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 NDNQ99608 321 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 TAOK3Q9H2K8 898 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 DENND2DQ9H6A0 471 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 OSGEPQ9NPF4 335 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 SEC63Q9UGP8 760 aaKnown RBP7.78□□□□□ -1.16
CSDE1-201ENST00000261443 PPP1R9AQ9ULJ8 1098 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 MROH5Q6ZUA9 1318 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 PITPNM2Q9BZ72 1349 aa7.78□□□□□ -1.16
CSDE1-201ENST00000261443 CASZ1Q86V15 1759 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 FOXO6A8MYZ6 492 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 PODXLO00592 558 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 IRS4O14654 1257 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-201ENST00000261443 ACSL3O95573 720 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 UCHL3P15374 230 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SLC9A1P19634 815 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 IGHMBP2P38935 993 aaKnown RBP7.77□□□□□ -1.17
CSDE1-201ENST00000261443 PSMC4P43686 418 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 ZRSR2Q15696 482 aaKnown RBP7.77□□□□□ -1.17
CSDE1-201ENST00000261443 ZCWPW2Q504Y3 356 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 RASIP1Q5U651 963 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 GALNT17Q6IS24 598 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 ARHGEF18Q6ZSZ5 1173 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 BRINP3Q76B58 766 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SESTD1Q86VW0 696 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 NELFCDQ8IXH7 590 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 RBM12BQ8IXT5 1001 aaKnown RBP7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SH3TC2Q8TF17 1288 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 MAGEB18Q96M61 343 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms